RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 RAB40CQ96S21 281 aa9.45□□□□□ -0.9
PDGFRA-204ENST00000504461 SIGLEC8Q9NYZ4 499 aa9.45□□□□□ -0.9
PDGFRA-204ENST00000504461 GSKIPQ9P0R6 139 aa9.45□□□□□ -0.9
PDGFRA-204ENST00000504461 RPS10-NUDT3A0A1W2PQS6 291 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 SSNA1O43805 119 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 IFNA10P01566 189 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 FCGR2BP31994 310 aaPredicted RBP9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 TAS2R30P59541 319 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 RAB11AP62491 216 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 OXA1LQ15070 435 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 SLC24A4Q8NFF2 622 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 RBKSQ9H477 322 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 TUBA4BQ9H853 241 aa9.44□□□□□ -0.9
PDGFRA-204ENST00000504461 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 C7orf66A4D0T2 115 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 FAM25EA8MYX2 175 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 A8MZ25 164 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 BMPR1BO00238 502 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 SCAF4O95104 1147 aaKnown RBP9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 NDUFB8O95169 186 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 CLEC3BP05452 202 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 GPX4P36969 197 aaPredicted RBP9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 SPSB3Q6PJ21 355 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 ZBTB8BQ8NAP8 495 aaPredicted RBP9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 OR4D5Q8NGN0 318 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 ASB13Q8WXK3 278 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 CACNG8Q8WXS5 425 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 SMIM8Q96KF7 97 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 OR10C1Q96KK4 312 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 C19orf73Q9NVV2 129 aa9.43□□□□□ -0.9
PDGFRA-204ENST00000504461 GGCTO75223 188 aaKnown RBP9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 RLN2P04090 185 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 RNASE2P10153 161 aaKnown RBP9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 SLC25A4P12235 298 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 PVALBP20472 110 aaPredicted RBP9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 NPY1RP25929 384 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 NPBWR1P48145 328 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 MFAP4P55083 255 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 SPINK9Q5DT21 86 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 OR2K2Q8NGT1 345 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 DYNLRB2Q8TF09 96 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 BSCL2Q96G97 398 aaPredicted RBP9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 TM2D3Q9BRN9 247 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 NMES1Q9C002 83 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 C21orf62Q9NYP8 219 aa9.42□□□□□ -0.9
PDGFRA-204ENST00000504461 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 IZUMO1RA6ND01 250 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 MPTX1A8MV57 137 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 PPP5D1E7EU14 171 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 I3L2K1 104 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 MT-CO2P00403 227 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 IFNA4P05014 189 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 LYL1P12980 280 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 CASC10Q5T4H9 136 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 GPHB5Q86YW7 130 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 ZNF502Q8TBZ5 544 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 STRAPQ9Y3F4 350 aaKnown RBP9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 DMRT1Q9Y5R6 373 aa9.41□□□□□ -0.9
PDGFRA-204ENST00000504461 NBEAL2Q6ZNJ1 2754 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 K7EIM0 57 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 L7N2F9 121 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 NUPL2O15504 423 aaKnown RBP9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 TSC22D2O75157 780 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 OR2C1O95371 312 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 IGHV3-23P01764 117 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 MBPP02686 304 aaPredicted RBP9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 ARL3P36405 182 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 OPRK1P41145 380 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 MFAP2P55001 183 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 POLR2GP62487 172 aaKnown RBP eCLIP9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 VAMP2P63027 116 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 IL15RAQ13261 267 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 CD300EQ496F6 205 aaPredicted RBP9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 CLEC19AQ6UXS0 136 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 C19orf35Q6ZS72 473 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 OR4X1Q8NH49 305 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 PINX1Q96BK5 328 aaKnown RBP9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 CITED4Q96RK1 184 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 MAGT1Q9H0U3 335 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 MED28Q9H204 178 aa9.4□□□□□ -0.9
PDGFRA-204ENST00000504461 ZNF320A2RRD8 509 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 GOSR2O14653 212 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 PET100P0DJ07 73 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 CD81P60033 236 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 RELQ04864 619 aaPredicted RBP9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 GUCA2BQ16661 112 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 HAGHQ16775 308 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 TMEM116Q8NCL8 245 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 NEURL2Q9BR09 285 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 TECRQ9NZ01 308 aaKnown RBP9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 PSENENQ9NZ42 101 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 ALG5Q9Y673 324 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 S4R3C0 116 aa9.39□□□□□ -0.91
PDGFRA-204ENST00000504461 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
PDGFRA-204ENST00000504461 LGALS9O00182 355 aa9.38□□□□□ -0.91
PDGFRA-204ENST00000504461 TGOLN2O43493 480 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms