RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GLMPQ8WWB7 406 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 CENPNQ96H22 339 aaPredicted RBP8.53□□□□□ -1.04
LSM6-204ENST00000504181 CCL28Q9NRJ3 127 aa8.53□□□□□ -1.04
LSM6-204ENST00000504181 SLC17A2O00624 439 aa8.52□□□□□ -1.05
LSM6-204ENST00000504181 TMEM50AO95807 157 aa8.52□□□□□ -1.05
LSM6-204ENST00000504181 PQLC1Q8N2U9 271 aa8.52□□□□□ -1.05
LSM6-204ENST00000504181 ZNF114Q8NC26 417 aa8.52□□□□□ -1.05
LSM6-204ENST00000504181 RXFP4Q8TDU9 374 aa8.52□□□□□ -1.05
LSM6-204ENST00000504181 SECTM1Q8WVN6 248 aa8.52□□□□□ -1.05
LSM6-204ENST00000504181 GFI1Q99684 422 aa8.52□□□□□ -1.05
LSM6-204ENST00000504181 SAV1Q9H4B6 383 aaPredicted RBP8.52□□□□□ -1.05
LSM6-204ENST00000504181 NRN1Q9NPD7 142 aa8.52□□□□□ -1.05
LSM6-204ENST00000504181 ARGLU1Q9NWB6 273 aaPredicted RBP8.52□□□□□ -1.05
LSM6-204ENST00000504181 ELF5Q9UKW6 265 aaPredicted RBP8.52□□□□□ -1.05
LSM6-204ENST00000504181 EBAG9O00559 213 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 SIVA1O15304 175 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 HIST1H1DP16402 221 aaKnown RBP8.51□□□□□ -1.05
LSM6-204ENST00000504181 AP2S1P53680 142 aaPredicted RBP8.51□□□□□ -1.05
LSM6-204ENST00000504181 ERVK-16P61578 105 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 PSG9Q00887 426 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 RAB11BQ15907 218 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 C2orf76Q3KRA6 126 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 HSD17B12Q53GQ0 312 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 C16orf54Q6UWD8 224 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 NFE4Q86UQ8 179 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 OR10R2Q8NGX6 335 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 OR51H1Q8NH63 302 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 TMEM230Q96A57 120 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 PLEKHA2Q9HB19 425 aa8.51□□□□□ -1.05
LSM6-204ENST00000504181 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
LSM6-204ENST00000504181 TMEM272A0A1B0GTI8 110 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 DBX1A6NMT0 343 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 MARCH11A6NNE9 402 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 WBP4O75554 376 aaKnown RBP8.5□□□□□ -1.05
LSM6-204ENST00000504181 CD1AP06126 327 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 CTXN2P0C2S0 81 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 GADD45AP24522 165 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 RORCP51449 518 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 KRTAP10-4P60372 401 aaPredicted RBP8.5□□□□□ -1.05
LSM6-204ENST00000504181 CATR1Q13166 79 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 TPRA1Q86W33 373 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 FAM3DQ96BQ1 224 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 TMEM80Q96HE8 168 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 LINC00052Q96N35 136 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 COMMD9Q9P000 198 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 U3KQE9 123 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 TNXBP22105 4242 aa8.5□□□□□ -1.05
LSM6-204ENST00000504181 IRGMA1A4Y4 181 aa8.49□□□□□ -1.05
LSM6-204ENST00000504181 PLAC8L1A1L4L8 177 aa8.49□□□□□ -1.05
LSM6-204ENST00000504181 GYG2O15488 501 aa8.49□□□□□ -1.05
LSM6-204ENST00000504181 SNAPC5O75971 98 aa8.49□□□□□ -1.05
LSM6-204ENST00000504181 RASSF2P50749 326 aa8.49□□□□□ -1.05
LSM6-204ENST00000504181 ZNF79Q15937 498 aa8.49□□□□□ -1.05
LSM6-204ENST00000504181 DNAL1Q4LDG9 190 aa8.49□□□□□ -1.05
LSM6-204ENST00000504181 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
LSM6-204ENST00000504181 AK6Q9Y3D8 172 aaKnown RBP8.49□□□□□ -1.05
LSM6-204ENST00000504181 F6UB75 175 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 HNRNPCP07910 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
LSM6-204ENST00000504181 AZU1P20160 251 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 M6PRP20645 277 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 DTYMKP23919 212 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 FAM78BQ5VT40 261 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 CNIH2Q6PI25 160 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 SIGLEC15Q6ZMC9 328 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 IGF2BP2-AS1Q96M15 143 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 SCPEP1Q9HB40 452 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 RAB22AQ9UL26 194 aa8.48□□□□□ -1.05
LSM6-204ENST00000504181 LOC100130705A0A1B0GUX0 176 aa8.47□□□□□ -1.05
LSM6-204ENST00000504181 KRASP01116 189 aa8.47□□□□□ -1.05
LSM6-204ENST00000504181 G6PCP35575 357 aa8.47□□□□□ -1.05
LSM6-204ENST00000504181 AADACL3Q5VUY0 350 aa8.47□□□□□ -1.05
LSM6-204ENST00000504181 OR13F1Q8NGS4 319 aa8.47□□□□□ -1.05
LSM6-204ENST00000504181 SLC7A6OSQ96CW6 309 aaPredicted RBP8.47□□□□□ -1.05
LSM6-204ENST00000504181 MRPL36Q9P0J6 103 aaKnown RBP8.47□□□□□ -1.05
LSM6-204ENST00000504181 PRNDQ9UKY0 176 aa8.47□□□□□ -1.05
LSM6-204ENST00000504181 NPIPB6E9PJ23 425 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 ZNF701M0R085 212 aaPredicted RBP8.46□□□□□ -1.06
LSM6-204ENST00000504181 UCHL1P09936 223 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 TSPOP30536 169 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 WNT4P56705 351 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 TIGITQ495A1 244 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 ZBTB34Q8NCN2 500 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 LGALS14Q8TCE9 139 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
LSM6-204ENST00000504181 ABHD1Q96SE0 405 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 SLC5A7Q9GZV3 580 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 FKBP11Q9NYL4 201 aa8.46□□□□□ -1.06
LSM6-204ENST00000504181 EFCAB10A6NFE3 127 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 MYL12BO14950 172 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 CLN5O75503 358 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 NXPH4O95158 308 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 HOXA5P20719 270 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 MSMO1Q15800 293 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 HES5Q5TA89 166 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 ZNF818PQ6ZRF7 136 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 MS4A15Q8N5U1 240 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 BPIFB6Q8NFQ5 453 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 COQ8AQ8NI60 647 aa8.45□□□□□ -1.06
LSM6-204ENST00000504181 WDR12Q9GZL7 423 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms