RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 SERTAD4Q9NUC0 356 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 GOLT1BQ9Y3E0 138 aa12.14□□□□□ -0.47
SNF8-203ENST00000504000 TCRBV4S1A1TA0A5B7 111 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 DPRXA6NFQ7 191 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 PEX7O00628 323 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 SPINK4O60575 86 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 MYCNOSP40205 109 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 TBR1Q16650 682 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 MLANAQ16655 118 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 C10orf113Q5VZT2 155 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
SNF8-203ENST00000504000 VHLLQ6RSH7 139 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 ZNF329Q86UD4 541 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 PDPNQ86YL7 162 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 LINC00311Q8N616 119 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 FLYWCH2Q96CP2 140 aaKnown RBP12.13□□□□□ -0.47
SNF8-203ENST00000504000 PAXXQ9BUH6 204 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 PCNX2A6NKB5 2137 aa12.13□□□□□ -0.47
SNF8-203ENST00000504000 NKX6-3A6NJ46 265 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 FSTL3O95633 263 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 C3orf79P0CE67 100 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 IGLC2P0DOY2 106 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 IGLC3P0DOY3 106 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 HIST1H1EP10412 219 aaKnown RBP12.12□□□□□ -0.47
SNF8-203ENST00000504000 TNFRSF1AP19438 455 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 TCL1AP56279 114 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 KIAA1644Q3SXP7 199 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 SPATA45Q537H7 98 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 OR2T6Q8NHC8 308 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 MRPL20Q9BYC9 149 aaKnown RBP12.12□□□□□ -0.47
SNF8-203ENST00000504000 ZNF355PQ9NSJ1 428 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 KLF12Q9Y4X4 402 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 C20orf202A1L168 122 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 SLAQ13239 276 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 MORN5Q5VZ52 161 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 PVRIGQ6DKI7 326 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 SPACA3Q8IXA5 215 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 ZADH2Q8N4Q0 377 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 DEFB108BQ8NET1 73 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 TMEM186Q96B77 213 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 SAP30LQ9HAJ7 183 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 FAM215AQ9Y5M1 114 aa12.12□□□□□ -0.47
SNF8-203ENST00000504000 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
SNF8-203ENST00000504000 TRAV5A0A0B4J249 113 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 WT1P19544 449 aaPredicted RBP12.11□□□□□ -0.47
SNF8-203ENST00000504000 PMCHP20382 165 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 ZNF137PP52743 207 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 CASP6P55212 293 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 SLC35B1P78383 322 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 SRSF6Q13247 344 aaKnown RBP12.11□□□□□ -0.47
SNF8-203ENST00000504000 FAM162BQ5T6X4 162 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 C1orf185Q5T7R7 199 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 PATE2Q6UY27 113 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 NUP35Q8NFH5 326 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 NUDT10Q8NFP7 164 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 FAM168AQ92567 244 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 NUDT11Q96G61 164 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 C7orf69Q9H7B7 122 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 ZFP30Q9Y2G7 519 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 TNCP24821 2201 aa12.11□□□□□ -0.47
SNF8-203ENST00000504000 IGKV1D-37A0A075B6S9 117 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 CD40P25942 277 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 ETFRF1Q6IPR1 90 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 ZCCHC24Q8N2G6 241 aaKnown RBP12.1□□□□□ -0.47
SNF8-203ENST00000504000 SNRNP40Q96DI7 357 aaKnown RBP12.1□□□□□ -0.47
SNF8-203ENST00000504000 FNDC4Q9H6D8 234 aaPredicted RBP12.1□□□□□ -0.47
SNF8-203ENST00000504000 SOX21Q9Y651 276 aaPredicted RBP12.1□□□□□ -0.47
SNF8-203ENST00000504000 CGB1A6NKQ9 187 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 CHRNB4P30926 498 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 CEACAM8P31997 349 aaPredicted RBP12.1□□□□□ -0.47
SNF8-203ENST00000504000 CA7P43166 264 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 MFAP2P55001 183 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 CT83Q5H943 113 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 TMEM190Q8WZ59 177 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 RND1Q92730 232 aa12.1□□□□□ -0.47
SNF8-203ENST00000504000 RBM14Q96PK6 669 aaKnown RBP12.1□□□□□ -0.47
SNF8-203ENST00000504000 MUC3AQ02505 3323 aa12.09□□□□□ -0.47
SNF8-203ENST00000504000 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
SNF8-203ENST00000504000 HYPMO75409 117 aa12.09□□□□□ -0.47
SNF8-203ENST00000504000 CRYGCP07315 174 aa12.09□□□□□ -0.47
SNF8-203ENST00000504000 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
SNF8-203ENST00000504000 ST6GALNAC6Q969X2 333 aa12.09□□□□□ -0.47
SNF8-203ENST00000504000 LINC00479Q96M42 142 aa12.09□□□□□ -0.47
SNF8-203ENST00000504000 ALKBH7Q9BT30 221 aaPredicted RBP12.09□□□□□ -0.47
SNF8-203ENST00000504000 MRPS16Q9Y3D3 137 aaKnown RBP12.09□□□□□ -0.47
SNF8-203ENST00000504000 RAI1Q7Z5J4 1906 aaPredicted RBP12.09□□□□□ -0.47
SNF8-203ENST00000504000 NCOR1O75376 2440 aa12.08□□□□□ -0.47
SNF8-203ENST00000504000 E7EUB6 86 aa12.08□□□□□ -0.48
SNF8-203ENST00000504000 IGLV2-23P01705 113 aa12.08□□□□□ -0.48
SNF8-203ENST00000504000 PYYP10082 97 aa12.08□□□□□ -0.48
SNF8-203ENST00000504000 PAX2Q02962 417 aa12.08□□□□□ -0.48
SNF8-203ENST00000504000 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
SNF8-203ENST00000504000 CYB5R2Q6BCY4 276 aa12.08□□□□□ -0.48
SNF8-203ENST00000504000 NPIPB3Q92617 1050 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms