RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 ENSAO43768 121 aaKnown RBP9.67□□□□□ -0.86
NUP54-202ENST00000502850 IGLV1-47P01700 117 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 RPL27AP46776 148 aaKnown RBP9.67□□□□□ -0.86
NUP54-202ENST00000502850 WT1-ASQ06250 92 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 C4orf17Q53FE4 359 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 PVRIGQ6DKI7 326 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 TEX38Q6PEX7 206 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 OR1P1Q8NH06 330 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 LINC01560Q8TB33 94 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 SRSF8Q9BRL6 282 aaKnown RBP9.67□□□□□ -0.86
NUP54-202ENST00000502850 SLC25A33Q9BSK2 321 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 INSIG2Q9Y5U4 225 aa9.67□□□□□ -0.86
NUP54-202ENST00000502850 PTPN13Q12923 2485 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 HECTD1Q9ULT8 2610 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 FLNCQ14315 2725 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 PPIAL4CA0A0B4J2A2 164 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 CYSRT1A8MQ03 144 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 SOD3P08294 240 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 PPIAL4GP0DN37 164 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 GNLYP22749 145 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 UQCRFS1P47985 274 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 GNG4P50150 75 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 PRSS8Q16651 343 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 TIGITQ495A1 244 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 C11orf42Q8N5U0 333 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 SGMS2Q8NHU3 365 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 TMEM190Q8WZ59 177 aa9.66□□□□□ -0.86
NUP54-202ENST00000502850 EAF1Q96JC9 268 aaPredicted RBP9.66□□□□□ -0.86
NUP54-202ENST00000502850 TRBV20OR9-2A0A075B6H5 130 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 A0A0U1RQK1 487 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 A0A1W2PPI3 338 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 ZNF320A2RRD8 509 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 HELTA6NFD8 242 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 IFITM10A6NMD0 228 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 BUB1B-PAK6H3BSN5 160 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 FOXH1O75593 365 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 LIPFP07098 398 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 OR10J4P0C629 311 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 PDLIM4P50479 330 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.86
NUP54-202ENST00000502850 DIAPH2-AS1Q14236 149 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 COX19Q49B96 90 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 C10orf113Q5VZT2 155 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 ZNF841Q6ZN19 808 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 MOB3BQ86TA1 216 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 OCC1Q8TAD7 63 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 NEU4Q8WWR8 484 aaPredicted RBP9.65□□□□□ -0.86
NUP54-202ENST00000502850 RPEQ96AT9 228 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 GPR61Q9BZJ8 451 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 GSN-AS1Q9NRJ2 163 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 IL36BQ9NZH7 164 aa9.65□□□□□ -0.86
NUP54-202ENST00000502850 IGHV1-3A0A0C4DH29 117 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 PSMB11A5LHX3 300 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 CGB1A6NKQ9 187 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 PLAUP00749 431 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 CRYGBP07316 175 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 PERPQ96FX8 193 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 PACRGQ96M98 296 aaPredicted RBP9.64□□□□□ -0.87
NUP54-202ENST00000502850 TRGV9Q99603 122 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 CBLN4Q9NTU7 201 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 DMRT1Q9Y5R6 373 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 COL12A1Q99715 3063 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 TNCP24821 2201 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 TRBV9A0A0B4J1U6 114 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 IGLC7A0M8Q6 106 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 CRYGCP07315 174 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 CEACAM3P40198 252 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 CNN1P51911 297 aaKnown RBP9.64□□□□□ -0.87
NUP54-202ENST00000502850 TAS2R60P59551 318 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 TNXAQ16473 311 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 OR5AU1Q8NGC0 362 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 OR2T6Q8NHC8 308 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 TMEM37Q8WXS4 190 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 ZNF503Q96F45 646 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 SIGLEC9Q9Y336 463 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 TRAPPC1Q9Y5R8 145 aa9.64□□□□□ -0.87
NUP54-202ENST00000502850 E7EUB6 86 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 FABP4P15090 132 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 COL8A2P25067 703 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 ERVFC1-1P60608 527 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 YPEL3P61236 119 aaPredicted RBP9.63□□□□□ -0.87
NUP54-202ENST00000502850 ZNF90Q03938 601 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 RPEL1Q2QD12 228 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 PYY3Q5JQD4 70 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 C10orf55Q5SWW7 151 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 PPP1R27Q86WC6 154 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 LY6G5BQ8NDX9 201 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 OR1L6Q8NGR2 347 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 NPIPB3Q92617 1050 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 FAM167A-AS1Q96KT0 104 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 HIST1H2BLQ99880 126 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 PAXXQ9BUH6 204 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 SLC25A2Q9BXI2 301 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
NUP54-202ENST00000502850 OSTCQ9NRP0 149 aa9.63□□□□□ -0.87
NUP54-202ENST00000502850 PGPEP1LA6NFU8 196 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms