RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 COMMD5Q9GZQ3 224 aa0.03□□□□□ -2.4
SMAD1-203ENST00000502342 TLNRD1Q9H1K6 362 aa0.03□□□□□ -2.4
SMAD1-203ENST00000502342 IMP3Q9NV31 184 aaKnown RBP0.03□□□□□ -2.4
SMAD1-203ENST00000502342 ERGIC3Q9Y282 383 aa0.03□□□□□ -2.4
SMAD1-203ENST00000502342 SLC35A3Q9Y2D2 325 aa0.03□□□□□ -2.4
SMAD1-203ENST00000502342 ASCC3Q8N3C0 2202 aaKnown RBP0.03□□□□□ -2.4
SMAD1-203ENST00000502342 CCL25O15444 150 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 C8orf88P0DMB2 117 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 RPS12P25398 132 aaKnown RBP0.02□□□□□ -2.41
SMAD1-203ENST00000502342 MED21Q13503 144 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 CIRBPQ14011 172 aaKnown RBP0.02□□□□□ -2.41
SMAD1-203ENST00000502342 SPINK9Q5DT21 86 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 LCA10Q71F78 164 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 FAM9CQ8IZT9 166 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 TMEM14CQ9P0S9 112 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 ALPK3Q96L96 1907 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 CASP8AP2Q9UKL3 1982 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 EVC2Q86UK5 1308 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 SYNE1Q8NF91 8797 aaKnown RBP0.02□□□□□ -2.41
SMAD1-203ENST00000502342 SCN3AQ9NY46 2000 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 PIK3R4Q99570 1358 aa0.02□□□□□ -2.41
SMAD1-203ENST00000502342 ZNF106Q9H2Y7 1883 aaKnown RBP0.01□□□□□ -2.41
SMAD1-203ENST00000502342 DPRXA6NFQ7 191 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 FAAHO00519 579 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 IFNA10P01566 189 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 OCM2P0CE71 109 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 SPINK7P58062 85 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 CLEC6AQ6EIG7 209 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 LPCAT3Q6P1A2 487 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 LINC00322Q6ZN03 302 aaPredicted RBP0.01□□□□□ -2.41
SMAD1-203ENST00000502342 LINC00301Q8NCQ3 95 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 PLPP5Q8NEB5 264 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 OR10J5Q8NHC4 309 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 ITFG2Q969R8 447 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 C6orf62Q9GZU0 229 aaPredicted RBP0.01□□□□□ -2.41
SMAD1-203ENST00000502342 DRC3Q9H069 523 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 OR51V1Q9H2C8 321 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 OR51I1Q9H343 314 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 C11orf68Q9H3H3 251 aaKnown RBP0.01□□□□□ -2.41
SMAD1-203ENST00000502342 PRTFDC1Q9NRG1 225 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 NHP2Q9NX24 153 aaKnown RBP0.01□□□□□ -2.41
SMAD1-203ENST00000502342 CMTM6Q9NX76 183 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 FBXL12Q9NXK8 326 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 HS3ST2Q9Y278 367 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 ECM29Q5VYK3 1845 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 DOCK3Q8IZD9 2030 aa0.01□□□□□ -2.41
SMAD1-203ENST00000502342 A0A0D9SG42 100 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 LRRN3E7EW58 273 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 H0Y980 276 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 IGLV3-1P01715 115 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 AP2S1P53680 142 aaPredicted RBP0□□□□□ -2.41
SMAD1-203ENST00000502342 TCL1AP56279 114 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 RAB5BP61020 215 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 PMAIP1Q13794 54 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 TRAPPC6BQ86SZ2 158 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 TAF1LQ8IZX4 1826 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 H1FXQ92522 213 aaKnown RBP0□□□□□ -2.41
SMAD1-203ENST00000502342 RAB8BQ92930 207 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 TOMM6Q96B49 74 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 PRRT1Q99946 306 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 EPDR1Q9UM22 224 aa0□□□□□ -2.41
SMAD1-203ENST00000502342 LSM5Q9Y4Y9 91 aaKnown RBP0□□□□□ -2.41
SMAD1-203ENST00000502342 MYO3BQ8WXR4 1341 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 TRAV9-1A0A075B6T8 112 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 A0A0A6YYH2 397 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 TRBV6-4A0A1B0GX49 114 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 TLCD2A6NGC4 264 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 A6NJ64 397 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 EEF1E1-BLOC1S5C9J1V9 151 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 BUB1B-PAK6H3BSN5 160 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 PSMD12O00232 456 aaPredicted RBP-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 SLC16A4O15374 487 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 KLF7O75840 302 aaPredicted RBP-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 HLA-DRB1P01911 266 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 KRTAP2-3P0C7H8 128 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 KDELR1P24390 212 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 S100A4P26447 101 aaKnown RBP-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 BRMS1LQ5PSV4 323 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 HIST2H3PS2Q5TEC6 136 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 SFXN4Q6P4A7 337 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 LINC00575Q6W349 94 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 OR13D1Q8NGV5 346 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 TEX47Q8TBZ9 253 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 KRTAP2-4Q9BYR9 128 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 KRTAP2-1Q9BYU5 128 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 XPNPEP1Q9NQW7 623 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 OSTCQ9NRP0 149 aa-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 V9GYY5 206 aaPredicted RBP-0.01□□□□□ -2.41
SMAD1-203ENST00000502342 HECW1Q76N89 1606 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 LINC00854A0A1B0GVQ3 168 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 EXOC1LA0A1B0GW35 172 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 M0R378 163 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 CDC42P60953 191 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 SNRPD2P62316 118 aaKnown RBP-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 CD200R1LQ6Q8B3 271 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 ANKRD29Q8N6D5 301 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 ATP6V1G3Q96LB4 118 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 NIPSNAP1Q9BPW8 284 aa-0.02□□□□□ -2.41
SMAD1-203ENST00000502342 DCSTAMPQ9H295 470 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms