RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 DEFB1P60022 68 aa6.47□□□□□ -1.37
CCDC171-209ENST00000498725 NUTF2P61970 127 aaKnown RBP6.47□□□□□ -1.37
CCDC171-209ENST00000498725 IZUMO4Q1ZYL8 232 aa6.47□□□□□ -1.37
CCDC171-209ENST00000498725 C6orf223Q8N319 242 aa6.47□□□□□ -1.37
CCDC171-209ENST00000498725 NARS2Q96I59 477 aaKnown RBP6.47□□□□□ -1.37
CCDC171-209ENST00000498725 ZNF2Q9BSG1 426 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-209ENST00000498725 YTHDF1Q9BYJ9 559 aaKnown RBP6.47□□□□□ -1.37
CCDC171-209ENST00000498725 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
CCDC171-209ENST00000498725 RHBDL2Q9NX52 303 aa6.47□□□□□ -1.37
CCDC171-209ENST00000498725 RRP15Q9Y3B9 282 aaKnown RBP6.47□□□□□ -1.37
CCDC171-209ENST00000498725 NOTOA8MTQ0 251 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 SCGNO76038 276 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 PMP2P02689 132 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 SNCAP37840 140 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 RFX2P48378 723 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 ERHP84090 104 aaKnown RBP6.46□□□□□ -1.38
CCDC171-209ENST00000498725 MLANAQ16655 118 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 TIGITQ495A1 244 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 PHLDA2Q53GA4 152 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 OGFRL1Q5TC84 451 aaPredicted RBP6.46□□□□□ -1.38
CCDC171-209ENST00000498725 ZNF367Q7RTV3 350 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 H2BFWTQ7Z2G1 175 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 OR5AP2Q8NGF4 316 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 OR5H6Q8NGV6 325 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 FAM210BQ96KR6 192 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 TSC22D3Q99576 134 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 DUSP21Q9H596 190 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 RNF167Q9H6Y7 350 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 IFT46Q9NQC8 304 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 MRPL36Q9P0J6 103 aaKnown RBP6.46□□□□□ -1.38
CCDC171-209ENST00000498725 DKK2Q9UBU2 259 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 RFNGQ9Y644 331 aa6.46□□□□□ -1.38
CCDC171-209ENST00000498725 NBDYA0A0U1RRE5 68 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 TRDV1A0A1B0GX56 115 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 TMEM189A5PLL7 270 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 H3BMM0 161 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 INAFM2P0DMQ5 153 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 CRYBB3P26998 211 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 FGF9P31371 208 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-209ENST00000498725 EIF2B2P49770 351 aaKnown RBP6.45□□□□□ -1.38
CCDC171-209ENST00000498725 DAD1P61803 113 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 PRCDQ00LT1 54 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 MXD1Q05195 221 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 GDF5OSQ5U4N7 250 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 GSG1LQ6UXU4 331 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 PRSS48Q7RTY5 328 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 BORCS5Q969J3 196 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 FXYD6Q9H0Q3 95 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 VCXQ9H320 206 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 NDUFB11Q9NX14 153 aa6.45□□□□□ -1.38
CCDC171-209ENST00000498725 HERC1Q15751 4861 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 KRTAP9-6A0A140TA67 174 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 RPS10-NUDT3A0A1W2PQS6 291 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 ZNF705FA8MVS1 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-209ENST00000498725 FAM90A26D6RGX4 464 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 NUDT3O95989 172 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 CLEC2LP0C7M8 214 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 ZNF705DP0CH99 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-209ENST00000498725 ZNF705BP0CI00 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-209ENST00000498725 OPRK1P41145 380 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 HSPE1P61604 102 aaKnown RBP6.44□□□□□ -1.38
CCDC171-209ENST00000498725 SNRPD3P62318 126 aaKnown RBP6.44□□□□□ -1.38
CCDC171-209ENST00000498725 DLK1P80370 383 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 ZNF705AQ6ZN79 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-209ENST00000498725 CMTM1Q8IZ96 169 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 SLC35G3Q8N808 338 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 OR4B1Q8NGF8 309 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 MRGPRFQ96AM1 343 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 SLC25A38Q96DW6 304 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 SEC22AQ96IW7 307 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 C7orf50Q9BRJ6 194 aaKnown RBP6.44□□□□□ -1.38
CCDC171-209ENST00000498725 AUNIPQ9H7T9 357 aa6.44□□□□□ -1.38
CCDC171-209ENST00000498725 YTHDF2Q9Y5A9 579 aaKnown RBP6.44□□□□□ -1.38
CCDC171-209ENST00000498725 SMIM9A6NGZ8 99 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 GPR31O00270 319 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 CLN5O75503 358 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 IGKV1-39P01597 117 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 IGKV1D-39P04432 117 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 HNRNPCP07910 306 aaKnown RBP eCLIP6.43□□□□□ -1.38
CCDC171-209ENST00000498725 HLA-DRB4P13762 266 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 AQP4P55087 323 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 IDNKQ5T6J7 187 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 SFXN4Q6P4A7 337 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 C16orf54Q6UWD8 224 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 TBC1D26Q86UD7 250 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 GLMPQ8WWB7 406 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 LINC00052Q96N35 136 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 NEU1Q99519 415 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 SLC35B3Q9H1N7 401 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 FNDC4Q9H6D8 234 aaPredicted RBP6.43□□□□□ -1.38
CCDC171-209ENST00000498725 TXNL4BQ9NX01 149 aaKnown RBP6.43□□□□□ -1.38
CCDC171-209ENST00000498725 HLA-DRB4X5D2U9 266 aa6.43□□□□□ -1.38
CCDC171-209ENST00000498725 TEX48A0A1B0GUV7 120 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 HBE1P02100 147 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 RNASE2P10153 161 aaKnown RBP6.42□□□□□ -1.38
CCDC171-209ENST00000498725 FUSP35637 526 aaKnown RBP eCLIP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms