RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 REPIN1Q9BWE0 567 aaKnown RBP12.59□□□□□ -0.39
C4A-259ENST00000498271 TRAV24A0A0B4J272 114 aa12.59□□□□□ -0.39
C4A-259ENST00000498271 H7C1H1 209 aa12.59□□□□□ -0.39
C4A-259ENST00000498271 MOSP00540 346 aa12.59□□□□□ -0.39
C4A-259ENST00000498271 LEPP41159 167 aa12.59□□□□□ -0.39
C4A-259ENST00000498271 TIMP4Q99727 224 aa12.59□□□□□ -0.39
C4A-259ENST00000498271 Q9H3A6 140 aa12.59□□□□□ -0.39
C4A-259ENST00000498271 H3BTX0 84 aa12.59□□□□□ -0.39
C4A-259ENST00000498271 EPDR1Q9UM22 224 aa12.59□□□□□ -0.39
C4A-259ENST00000498271 COL4A6Q14031 1691 aa12.58□□□□□ -0.39
C4A-259ENST00000498271 COX11Q9Y6N1 276 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 ZDBF2Q9HCK1 2354 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 IGLV3-32A0A0A0MS00 114 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 TMEM105Q8N8V8 129 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 OR5AN1Q8NGI8 311 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 SEMA5BQ9P283 1151 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 HTN1P15515 57 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 GAGE2BQ13066 116 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 GAGE2EQ4V326 116 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 RPL39P5Q59GN2 51 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 GAGE2DQ9UEU5 116 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
C4A-259ENST00000498271 IGKV3-7A0A075B6H7 116 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 A0A0A6YYD4 124 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 IGKV1D-13A0A0B4J2D9 117 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 IGKV1-13P0DP09 117 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 CCL8P80075 99 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 FAM166AQ6J272 317 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 MOB4Q9Y3A3 225 aa12.58□□□□□ -0.4
C4A-259ENST00000498271 LOC102723996A0A087X1L8 192 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 IGHV3-72A0A0B4J1Y9 119 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 EREGO14944 169 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 C10orf91Q5T1B1 145 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 TRAV8-4A0A0B4J246 113 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 ITGB1BP1O14713 200 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 IGKCP01834 107 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 CLPSP04118 112 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 TPTE2P1Q5T6R2 138 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 IGKV1-9A0A0C4DH69 117 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 GBF1Q92538 1859 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 FOXI3A8MTJ6 420 aaPredicted RBP12.57□□□□□ -0.4
C4A-259ENST00000498271 ASIPP42127 132 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 C17orf82Q86X59 251 aaPredicted RBP12.57□□□□□ -0.4
C4A-259ENST00000498271 KLHDC3Q9BQ90 382 aa12.57□□□□□ -0.4
C4A-259ENST00000498271 NPPCP23582 126 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 EFNB3Q15768 340 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 C15orf61A6NNL5 157 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 H3BRM9 83 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 MRAP2Q96G30 205 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 COQ2Q96H96 371 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 DSCR9P59020 149 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 CACNG7P62955 275 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 WFDC3Q8IUB2 231 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
C4A-259ENST00000498271 REG1AP05451 166 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 C3orf79P0CE67 100 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 SRSF1Q07955 248 aaKnown RBP eCLIP12.55□□□□□ -0.4
C4A-259ENST00000498271 ZNF319Q9P2F9 582 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 SVILO95425 2214 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 CLEC7AQ9BXN2 247 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 GAGE12BA1L429 117 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 NDUFA3O95167 84 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 ZNF56Q15929 161 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 FAM159AQ6UWV7 190 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 SLC25A48Q6ZT89 311 aaKnown RBP12.55□□□□□ -0.4
C4A-259ENST00000498271 ASXL3Q9C0F0 2248 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
C4A-259ENST00000498271 YPEL1O60688 119 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 ORMDL2Q53FV1 153 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 EEF1AKMT3Q96AZ1 226 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 LYZL4Q96KX0 146 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 YPEL2Q96QA6 119 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 ASCL2Q99929 193 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 CGB1A6NKQ9 187 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 IGHV2-5P01817 119 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 PF4P02776 101 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 PAX2Q02962 417 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 Q0VG73 95 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 MST1LQ2TV78 715 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 YAE1D1Q9NRH1 226 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 UPK2O00526 184 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 EFNA2O43921 213 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
C4A-259ENST00000498271 CFPP27918 469 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 OR10W1Q8NGF6 305 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 LEAP2Q969E1 77 aa12.54□□□□□ -0.4
C4A-259ENST00000498271 B9A039 149 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 NMSQ5H8A3 153 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 ZNF497Q6ZNH5 498 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 SDK2Q58EX2 2172 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 KBTBD11-OT1A0A1B0GTJ5 212 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 MPV17L2Q567V2 206 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 OR13A1Q8NGR1 328 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 PEAR1Q5VY43 1037 aaPredicted RBP12.53□□□□□ -0.4
C4A-259ENST00000498271 Q6ZT83 130 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 SNHG12Q9BXW3 62 aa12.53□□□□□ -0.4
C4A-259ENST00000498271 TCRBV4S1A1TA0A5B7 111 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms