RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 KIAA0141Q14154 515 aaPredicted RBP10.51□□□□□ -0.73
CPNE1-227ENST00000498056 KLK9Q2XQG4 91 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 Q5BKY6 102 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 PVRIGQ6DKI7 326 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 LILRB2Q8N423 598 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 TMEM217Q8N7C4 229 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 VN1R17PQ8TDU5 208 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 SCARB1Q8WTV0 552 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 ACY3Q96HD9 319 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 SLC35E1Q96K37 410 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 KLK9Q9UKQ9 250 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 STAB1Q9NY15 2570 aa10.51□□□□□ -0.73
CPNE1-227ENST00000498056 TRBV7-1A0A0A6YYK4 115 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 OR2T8A6NH00 312 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 G3V3Q6 166 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 TRBV12-3P01733 135 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 RND2P52198 227 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 AKR1C1Q04828 323 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 SLC38A11Q08AI6 406 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 ETFRF1Q6IPR1 90 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 SHISA2Q6UWI4 295 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 CLEC19AQ6UXS0 136 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 TMEM252Q8N6L7 170 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 OR10P1Q8NGE3 313 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 ZNF502Q8TBZ5 544 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 ST6GAL2Q96JF0 529 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 DUX3Q96PT4 197 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 RNF126Q9BV68 326 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 SLC25A31Q9H0C2 315 aa10.5□□□□□ -0.73
CPNE1-227ENST00000498056 IGHV4OR15-8A0A075B7B6 117 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 A0A087WW49 117 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 ADARB2-AS1A8MUL3 147 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 PRSS46E5RG02 174 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 PPP5D1E7EU14 171 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 GNG7O60262 68 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 SCAF4O95104 1147 aaKnown RBP10.49□□□□□ -0.73
CPNE1-227ENST00000498056 SLC25A4P12235 298 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 LYL1P12980 280 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 ARL3P36405 182 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 NUP62P37198 522 aaPredicted RBP10.49□□□□□ -0.73
CPNE1-227ENST00000498056 SULT1A1P50225 295 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 MFAP4P55083 255 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 HBG1P69891 147 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 HBG2P69892 147 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 MLANAQ16655 118 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 ZNF343Q6P1L6 599 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 HAPLN4Q86UW8 402 aa10.49□□□□□ -0.73
CPNE1-227ENST00000498056 MRPL36Q9P0J6 103 aaKnown RBP10.49□□□□□ -0.73
CPNE1-227ENST00000498056 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.48□□□□□ -0.73
CPNE1-227ENST00000498056 UBE2L5PA0A1B0GUS4 154 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 PMS2P5A8MQ11 134 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 I3L521 148 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 ARPC5O15511 151 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 SCGB2A1O75556 95 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 PF4P02776 101 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 RPL12P30050 165 aaKnown RBP10.48□□□□□ -0.73
CPNE1-227ENST00000498056 NPBWR1P48145 328 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 DLK1P80370 383 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 BAXQ07812 192 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 ARL16Q0P5N6 197 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 TCTE3Q8IZS6 198 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 PEF1Q9UBV8 284 aaKnown RBP10.48□□□□□ -0.73
CPNE1-227ENST00000498056 HSPB11Q9Y547 144 aa10.48□□□□□ -0.73
CPNE1-227ENST00000498056 F8W735 103 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-227ENST00000498056 TGOLN2O43493 480 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 AP2S1P53680 142 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-227ENST00000498056 NHLH2Q02577 135 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 CD300CQ08708 224 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 ZNF616Q08AN1 781 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 CLINT1Q14677 625 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 RPEL1Q2QD12 228 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 KRTAP21-3Q3LHN1 58 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 FAM209BQ5JX69 171 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 INO80EQ8NBZ0 244 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-227ENST00000498056 OR11H1Q8NG94 326 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 OR1S2Q8NGQ3 325 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 OR5C1Q8NGR4 320 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 OR4X1Q8NH49 305 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 NPIPB3Q92617 1050 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 DPF1Q92782 380 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 BSCL2Q96G97 398 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-227ENST00000498056 RAX2Q96IS3 184 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 SMIM3Q9BZL3 60 aa10.47□□□□□ -0.73
CPNE1-227ENST00000498056 GAR1Q9NY12 217 aaKnown RBP10.47□□□□□ -0.73
CPNE1-227ENST00000498056 IGHV3-35A0A0C4DH35 117 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 LINC01619G3V211 115 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 BMPR1BO00238 502 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 NUPL2O15504 423 aaKnown RBP10.46□□□□□ -0.73
CPNE1-227ENST00000498056 CLN5O75503 358 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 TSPAN15O95858 294 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 CLEC3BP05452 202 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 GPX4P36969 197 aaPredicted RBP10.46□□□□□ -0.73
CPNE1-227ENST00000498056 RUNX1Q01196 453 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 GAMTQ14353 236 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 ZNF546Q86UE3 836 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 OR4F17Q8NGA8 305 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 CACNG8Q8WXS5 425 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 OR4F4Q96R69 305 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 TMEM147Q9BVK8 224 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 UQCC1Q9NVA1 299 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms