RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 FNDC4Q9H6D8 234 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-209ENST00000497564 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
VPS26A-209ENST00000497564 TRRAPQ9Y4A5 3859 aa11.13□□□□□ -0.63
VPS26A-209ENST00000497564 CLDN34H7C241 214 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 AP4M1O00189 453 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 BRI3O95415 125 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 DEFA4P12838 97 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 HIST1H1BP16401 226 aaKnown RBP11.12□□□□□ -0.63
VPS26A-209ENST00000497564 GAMTQ14353 236 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 C19orf35Q6ZS72 473 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 HSD17B11Q8NBQ5 300 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 TMED6Q8WW62 240 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 SLC35E1Q96K37 410 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 NPFFR1Q9GZQ6 430 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 TNFRSF19Q9NS68 423 aa11.12□□□□□ -0.63
VPS26A-209ENST00000497564 TRAV41A0A0B4J266 112 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 I3L2K1 104 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 SOX15O60248 233 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 FGF7P21781 194 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 OPRK1P41145 380 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 ECSCRQ19T08 205 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 C9orf152Q5JTZ5 239 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 TEPPQ6URK8 271 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 BTNL8Q6UX41 500 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 OR2G3Q8NGZ4 309 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 MISP3Q96FF7 219 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 SLC25A32Q9H2D1 315 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 PKD1L1Q8TDX9 2849 aa11.11□□□□□ -0.63
VPS26A-209ENST00000497564 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 G3V318 75 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 H3BUA1 57 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 K7EIM0 57 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 MT-CO2P00403 227 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 RNASE1P07998 156 aaKnown RBP11.1□□□□□ -0.63
VPS26A-209ENST00000497564 SULT1A2P50226 295 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 SERF2P84101 59 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 RUNX1Q01196 453 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 AKR1C1Q04828 323 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 Q6ZS46 218 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 Q8N2B8 174 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 THAP8Q8NA92 274 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 TMEM116Q8NCL8 245 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 OR5T1Q8NG75 326 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 LRRC20Q8TCA0 184 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 NPCDR1Q9BY65 106 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 SH3BGRL3Q9H299 93 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 THYN1Q9P016 225 aa11.1□□□□□ -0.63
VPS26A-209ENST00000497564 TRBV9A0A0B4J1U6 114 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 C17orf112F2Z3M2 114 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 PPIFP30405 207 aaKnown RBP11.09□□□□□ -0.63
VPS26A-209ENST00000497564 RAB5CP51148 216 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
VPS26A-209ENST00000497564 MLANAQ16655 118 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 C12orf54Q6X4T0 127 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 MGST2Q99735 147 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 RSG1Q9BU20 258 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 ZNF702PQ9H963 129 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
VPS26A-209ENST00000497564 IGKV1OR2-108A0A075B7D4 117 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 UMAD1C9J7I0 102 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 PRH1P02810 166 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 FCGR2BP31994 310 aaPredicted RBP11.08□□□□□ -0.64
VPS26A-209ENST00000497564 CFHR3Q02985 330 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 RAB31Q13636 194 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 AWAT1Q58HT5 328 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 CLLU1Q5K131 121 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 ZNF709Q8N972 641 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 OR4X1Q8NH49 305 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 OR2T6Q8NHC8 308 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 VN1R17PQ8TDU5 208 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 RNF141Q8WVD5 230 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 GGTLC1Q9BX51 225 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 MRPL36Q9P0J6 103 aaKnown RBP11.08□□□□□ -0.64
VPS26A-209ENST00000497564 CMYA5Q8N3K9 4069 aa11.08□□□□□ -0.64
VPS26A-209ENST00000497564 AGPAT2O15120 278 aa11.07□□□□□ -0.64
VPS26A-209ENST00000497564 CAMLGP49069 296 aa11.07□□□□□ -0.64
VPS26A-209ENST00000497564 RND2P52198 227 aa11.07□□□□□ -0.64
VPS26A-209ENST00000497564 FAM74A1Q5RGS3 127 aa11.07□□□□□ -0.64
VPS26A-209ENST00000497564 NECAP1Q8NC96 275 aa11.07□□□□□ -0.64
VPS26A-209ENST00000497564 SAT2Q96F10 170 aaPredicted RBP11.07□□□□□ -0.64
VPS26A-209ENST00000497564 ACY3Q96HD9 319 aa11.07□□□□□ -0.64
VPS26A-209ENST00000497564 MGAM2Q2M2H8 2515 aa11.07□□□□□ -0.64
VPS26A-209ENST00000497564 IGKV1D-37A0A075B6S9 117 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 FAM181BA6NEQ2 426 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 OR2J3O76001 311 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 NDUFB8O95169 186 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 NMBP08949 121 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
VPS26A-209ENST00000497564 RAB14P61106 215 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 DPPA3Q6W0C5 159 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 TMEM182Q6ZP80 229 aaPredicted RBP11.06□□□□□ -0.64
VPS26A-209ENST00000497564 NPIPB3Q92617 1050 aa11.06□□□□□ -0.64
VPS26A-209ENST00000497564 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
VPS26A-209ENST00000497564 ATP6V0BQ99437 205 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms