RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	DPPA5	A6NC42	116 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	GPR31	O00270	319 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	NDUFA4	O00483	81 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	HPGDS	O60760	199 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	GABARAP	O95166	117 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	KRAS	P01116	189 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	IFNA6	P05013	189 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	RNASE2	P10153	161 aa	Known RBP	4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	C4BPB	P20851	252 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	RANBP1	P43487	201 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	CBX5	P45973	191 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	HERV-K104	P61576	105 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	VBP1	P61758	197 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	PRCD	Q00LT1	54 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	PMS2P11	Q13670	270 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	TATDN3	Q17R31	274 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	BSX	Q3C1V8	233 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	RNASE12	Q5GAN4	147 aa	Known RBP	4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	TMEM69	Q5SWH9	247 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	THOC7	Q6I9Y2	204 aa	Known RBP	4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368		Q6ZWC4	215 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	DMBX1	Q8NFW5	382 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR1L6	Q8NGR2	347 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR1L8	Q8NGR8	309 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR5H2	Q8NGV7	314 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	MARC2	Q969Z3	335 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	RNF183	Q96D59	192 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	BSCL2	Q96G97	398 aa	Predicted RBP	4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	ATP6V0B	Q99437	205 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	FUNDC2	Q9BWH2	189 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	COMMD5	Q9GZQ3	224 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	NXF2	Q9GZY0	626 aa	Known RBP	4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	VSIR	Q9H7M9	311 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	DAZ1	Q9NQZ3	744 aa	Known RBP	4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	C21orf62	Q9NYP8	219 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	SMPX	Q9UHP9	88 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	TP53TG1	Q9Y2A0	90 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	NACA	E9PAV3	2078 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	INS-IGF2	F8WCM5	200 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368		K7EMT4	169 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	NUPL2	O15504	423 aa	Known RBP	4	□□□□□ -1.77
UBE3C-208	ENST00000497368	DEDD	O75618	318 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	MT-CO2	P00403	227 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	APOA1	P02647	267 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	NPS	P0C0P6	89 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	RPL35A	P18077	110 aa	Known RBP	4	□□□□□ -1.77
UBE3C-208	ENST00000497368	TAS2R46	P59540	309 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	RND3	P61587	244 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	FAM106A	Q4KMX7	169 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	AARD	Q4LEZ3	155 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	SLC25A24	Q6NUK1	477 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	FAAP20	Q6NZ36	180 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	SPSB3	Q6PJ21	355 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	PLET1	Q6UQ28	207 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	TOMM20L	Q6UXN7	152 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	SLC16A13	Q7RTY0	426 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	SNX29P2	Q8IUI4	249 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368		Q8NAQ8	132 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR1P1	Q8NH06	330 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR5B3	Q8NH48	314 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR52I2	Q8NH67	350 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	CD300LF	Q8TDQ1	290 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	ABHD1	Q96SE0	405 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	HINT2	Q9BX68	163 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	IFT46	Q9NQC8	304 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	DIABLO	Q9NR28	239 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	FAM212B	Q9NTI7	297 aa	Predicted RBP	4	□□□□□ -1.77
UBE3C-208	ENST00000497368	KLK11	Q9UBX7	282 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	UFC1	Q9Y3C8	167 aa		4	□□□□□ -1.77
UBE3C-208	ENST00000497368	KIR2DL5B	A0A0G2JN68	375 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	KIR2DL5B	A0A0G2JPC4	375 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	C15orf62	A8K5M9	175 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	ST8SIA3	O43173	380 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	SPRY2	O43597	315 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	DHFR	P00374	187 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	IGKV1-17	P01599	117 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	CD74	P04233	296 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	CD3D	P04234	171 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	DEFA4	P12838	97 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	UCP1	P25874	307 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	PRSS3	P35030	304 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	RCVRN	P35243	200 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	PPP5C	P53041	499 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	RAB32	Q13637	225 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	CEMP1	Q6PRD7	247 aa	Predicted RBP	3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	GSG1L	Q6UXU4	331 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	KIR2DL5A	Q8N109	375 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	UBAC2	Q8NBM4	344 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	TSPAN14	Q8NG11	270 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR13C8	Q8NGS7	320 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	KIR2DL5B	Q8NHK3	375 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	TMEM230	Q96A57	120 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	S100A16	Q96FQ6	103 aa	Known RBP	3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	C20orf24	Q9BUV8	137 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	RHPN1-AS1	Q9BWJ2	59 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	SCRT1	Q9BWW7	348 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	C11orf68	Q9H3H3	251 aa	Known RBP	3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368		Q9H521	79 aa		3.99	□□□□□ -1.77
UBE3C-208	ENST00000497368	SCPEP1	Q9HB40	452 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms