RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 RPP25LQ8N5L8 163 aaKnown RBP12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 MCFD2Q8NI22 146 aa12.35□□□□□ -0.43
TRAPPC3-207ENST00000497251 PPP5CP53041 499 aa12.34□□□□□ -0.43
TRAPPC3-207ENST00000497251 SUB1P53999 127 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAPPC3-207ENST00000497251 PIGPP57054 158 aa12.34□□□□□ -0.43
TRAPPC3-207ENST00000497251 SCGB2B2Q4G0G5 96 aa12.34□□□□□ -0.43
TRAPPC3-207ENST00000497251 ZNF600Q6ZNG1 722 aa12.34□□□□□ -0.43
TRAPPC3-207ENST00000497251 CCDC71LQ8N9Z2 235 aa12.34□□□□□ -0.43
TRAPPC3-207ENST00000497251 SOSTQ9BQB4 213 aa12.34□□□□□ -0.43
TRAPPC3-207ENST00000497251 CCDC160A6NGH7 325 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 DBX1A6NMT0 343 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 DISC1C4P0D8 188 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 ZNF701M0R085 212 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 ST8SIA3O43173 380 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 CA1P00915 261 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 AKAIN1P0CW23 69 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 TNFSF8P32971 234 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 SNCAP37840 140 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 TFPI2P48307 235 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 SURF2Q15527 256 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 TOMM20LQ6UXN7 152 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 ZNF414Q96IQ9 312 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 RBM38Q9H0Z9 239 aaKnown RBP12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 COPZ2Q9P299 210 aa12.33□□□□□ -0.44
TRAPPC3-207ENST00000497251 FABP12A6NFH5 140 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 IGKV1-39P01597 117 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 IGKV1D-39P04432 117 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 PI3P19957 117 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 NANOS2P60321 138 aaKnown RBP12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 PVRIGQ6DKI7 326 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 CENPSQ8N2Z9 138 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 OR13C8Q8NGS7 320 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 MRGPRFQ96AM1 343 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 GRAMD2BQ96HH9 432 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 MS4A6AQ9H2W1 248 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 FBXL17Q9UF56 701 aa12.32□□□□□ -0.44
TRAPPC3-207ENST00000497251 C3orf85A0A1B0GTC6 90 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 ANKRD20A5PA0PJZ0 165 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 SPP1P10451 314 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 NPPCP23582 126 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 STHQ8IWL8 128 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 GBGT1Q8N5D6 347 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 OR4C16Q8NGL9 310 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 MARCH1Q8TCQ1 289 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 PINX1Q96BK5 328 aaKnown RBP12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 NARS2Q96I59 477 aaKnown RBP12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 TP53RKQ96S44 253 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 PRRT1Q99946 306 aa12.31□□□□□ -0.44
TRAPPC3-207ENST00000497251 IGKV3-7A0A075B6H7 116 aa12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 DEDDO75618 318 aa12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 TMEM50AO95807 157 aa12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 MIFP14174 115 aa12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 EIF2B2P49770 351 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 RPL11P62913 178 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 FAAP20Q6NZ36 180 aa12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 ST8SIA2Q92186 375 aa12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 C14orf166Q9Y224 244 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 PUS1Q9Y606 427 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAPPC3-207ENST00000497251 TRAV30A0A087WSZ9 112 aa12.29□□□□□ -0.44
TRAPPC3-207ENST00000497251 UCP1P25874 307 aa12.29□□□□□ -0.44
TRAPPC3-207ENST00000497251 S100A5P33763 92 aa12.29□□□□□ -0.44
TRAPPC3-207ENST00000497251 DEFB131AP59861 70 aa12.29□□□□□ -0.44
TRAPPC3-207ENST00000497251 ZNF124Q15973 351 aa12.29□□□□□ -0.44
TRAPPC3-207ENST00000497251 METTL26Q96S19 204 aa12.29□□□□□ -0.44
TRAPPC3-207ENST00000497251 PDCD10Q9BUL8 212 aa12.29□□□□□ -0.44
TRAPPC3-207ENST00000497251 SCP2D1Q9UJQ7 156 aa12.29□□□□□ -0.44
TRAPPC3-207ENST00000497251 IGHV3OR16-13A0A075B7E8 117 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 IGHV3-74A0A0B4J1X5 117 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 P0C879 139 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 CRYBB3P26998 211 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 AKR1C2P52895 323 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 TRIM16LQ309B1 348 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 SLC35G3Q8N808 338 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 OR51S1Q8NGJ8 323 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 OR4X1Q8NH49 305 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 ZFAND3Q9H8U3 227 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 GPR132Q9UNW8 380 aa12.28□□□□□ -0.44
TRAPPC3-207ENST00000497251 CLN5O75503 358 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 IFNA17P01571 189 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 IGKV1-5P01602 117 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 AP2S1P53680 142 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 Q8NAQ8 132 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 SCGB3A2Q96PL1 93 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 TMEM222Q9H0R3 208 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 ENY2Q9NPA8 101 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 CACFD1Q9UGQ2 172 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 RABAC1Q9UI14 185 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 V9GYH0 126 aa12.27□□□□□ -0.45
TRAPPC3-207ENST00000497251 A0A0B4J293 547 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 ZNF705EA8MWA4 302 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 CDS2O95674 445 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 IGHV3-48P01763 117 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 FAUP35544 74 aaKnown RBP12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 AP3S2P59780 193 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 DHODHQ02127 395 aa12.26□□□□□ -0.45
TRAPPC3-207ENST00000497251 SP6Q3SY56 376 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms