RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 CAMK2N1Q7Z7J9 78 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 ANKRD29Q8N6D5 301 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 SCGB1C1Q8TD33 95 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 CT55Q8WUE5 264 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 C15orf40Q8WUR7 153 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 SKA2Q8WVK7 121 aaPredicted RBP2.53□□□□□ -2
EXOSC3-208ENST00000496910 LZICQ8WZA0 190 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 TSPAN32Q96QS1 320 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 GPER1Q99527 375 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 TMEM147Q9BVK8 224 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 TBL1XR1Q9BZK7 514 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 EIF5A2Q9GZV4 153 aaKnown RBP2.53□□□□□ -2
EXOSC3-208ENST00000496910 SH3BGRL3Q9H299 93 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 NOX3Q9HBY0 568 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 ZNF331Q9NQX6 463 aaPredicted RBP2.53□□□□□ -2
EXOSC3-208ENST00000496910 NUBP2Q9Y5Y2 271 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 MYH10P35580 1976 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 CHD5Q8TDI0 1954 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 DNAH7Q8WXX0 4024 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV1OR15-9A0A0B4J2B8 117 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 OR5H1A6NKK0 313 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 RFPL4AA6NLU0 287 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 OR4C45A6NMZ5 311 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 RFPL4AL1F8VTS6 287 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 G3V2T6 193 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 SOCS1O15524 211 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 PIAS1O75925 651 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV3-13P01766 116 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 HLA-DRB1P01911 266 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 SPI1P17947 270 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 CDK2P24941 298 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 AKR1C3P42330 323 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 DAPP51397 102 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 NCALDP61601 193 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 TNFAIP6P98066 277 aaPredicted RBP2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 MPPED2Q15777 294 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 NDUFA5Q16718 116 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 C12orf74Q32Q52 190 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 SMIM21Q3B7S5 101 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 KLHL12Q53G59 568 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 C5orf46Q6UWT4 87 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 TOMM20LQ6UXN7 152 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 PDPNQ86YL7 162 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 C1orf174Q8IYL3 243 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 EXOC3-AS1Q8N2X6 119 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF664Q8N3J9 261 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 FAM24BQ8N5W8 94 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF525Q8N782 197 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 SLC25A29Q8N8R3 303 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 GDPD1Q8N9F7 314 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 SUMF2Q8NBJ7 301 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 OR4K5Q8NGD3 323 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 OR9A2Q8NGT5 310 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 LINC01006Q8NI28 216 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 GNPDA2Q8TDQ7 276 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 REEP6Q96HR9 211 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 ERMAPQ96PL5 475 aaPredicted RBP2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 DERL3Q96Q80 235 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 CAMK2N2Q96S95 79 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 PFDN5Q99471 154 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 SOSTQ9BQB4 213 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 EFCAB11Q9BUY7 163 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 CCDC90BQ9GZT6 254 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 CXorf21Q9HAI6 301 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 LYRM2Q9NU23 88 aaPredicted RBP2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 RASL12Q9NYN1 266 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF492Q9P255 531 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 RPS6KB2Q9UBS0 482 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 SLC23A2Q9UGH3 650 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 ASB4Q9Y574 426 aa2.52□□□□□ -2.01
EXOSC3-208ENST00000496910 GTF3C1Q12789 2109 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 NCOA6Q14686 2063 aaPredicted RBP2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV3-66A0A0C4DH42 116 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 A0A1B0GV90 55 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 A0A1B0GVX0 72 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 ZFP92A6NM28 416 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 SIGLEC16A6NMB1 481 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 B4DEV8 164 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 DEDDO75618 318 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 CCNKO75909 580 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 CDRT1O95170 752 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 APOMO95445 188 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF682O95780 498 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 LTAP01374 205 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 IGHV3-11P01762 117 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 CSN2P05814 226 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 LGALS1P09382 135 aaKnown RBP2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 GABARAPL2P60520 117 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 KIAA0040Q15053 153 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 LAIR2Q6ISS4 152 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 GUSBP11Q6P575 273 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 ZDHHC22Q8N966 263 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 ROPN1LQ96C74 230 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 ZNF414Q96IQ9 312 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 CNBD2Q96M20 576 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 FOPNLQ96NB1 174 aa2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 HDHD3Q9BSH5 251 aaPredicted RBP2.51□□□□□ -2.01
EXOSC3-208ENST00000496910 MED28Q9H204 178 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms