RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 CD177Q8N6Q3 437 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 TMEM217Q8N7C4 229 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 OR51H1Q8NH63 302 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 MRPL24Q96A35 216 aaKnown RBP5.07□□□□□ -1.6
SSBP1-213ENST00000496622 C1QTNF4Q9BXJ3 329 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 FBXL17Q9UF56 701 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 LAMP3Q9UQV4 416 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF835Q9Y2P0 537 aa5.07□□□□□ -1.6
SSBP1-213ENST00000496622 CEACAM18A8MTB9 384 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF727A8MUV8 499 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 B4DEV8 164 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 PHF1O43189 567 aaPredicted RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 SMIM17P0DL12 118 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 RPL8P62917 257 aaKnown RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 MEF2BQ02080 365 aaPredicted RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 COL10A1Q03692 680 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 MPV17LQ2QL34 196 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 TIGITQ495A1 244 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 ABCA11PQ4W5N1 156 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 SOHLH1Q5JUK2 328 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 UNQ6126/PRO20091Q6UXV3 157 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 TEX43Q6ZNM6 134 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 OR1L1Q8NH94 360 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 RAB39BQ96DA2 213 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 ANAPC13Q9BS18 74 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 FNDC4Q9H6D8 234 aaPredicted RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 TAF9BQ9HBM6 251 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 SERTAD4Q9NUC0 356 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 POLDIP2Q9Y2S7 368 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 IGKV1D-17A0A075B6S4 117 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 IGHV1-69-2A0A0G2JMI3 117 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 MAP1LC3B2A6NCE7 125 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 HMGB3O15347 200 aaKnown RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 LY6HO94772 140 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 TMEM50AO95807 157 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 IGLC1P0CG04 106 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 HIST1H1EP10412 219 aaKnown RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 PSG2P11465 335 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 USF1P22415 310 aaPredicted RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF146Q15072 292 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 FFAR4Q5NUL3 377 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 ACP7Q6ZNF0 438 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF429Q86V71 674 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 OR10V1Q8NGI7 309 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 LEAP2Q969E1 77 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 FLYWCH2Q96CP2 140 aaKnown RBP5.06□□□□□ -1.6
SSBP1-213ENST00000496622 COQ2Q96H96 371 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 RNF126Q9BV68 326 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 MAP1LC3BQ9GZQ8 125 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 CXXC4Q9H2H0 198 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 KIAA1456Q9P272 454 aa5.06□□□□□ -1.6
SSBP1-213ENST00000496622 ARFGEF3Q5TH69 2177 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 RNF222A6NCQ9 220 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 LYNX1G3V0Z9 82 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 SH2D1BO14796 132 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 TAAR5O14804 337 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 IGHV1-46P01743 117 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 LYNX1P0DP58 116 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 SNCAP37840 140 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 ECI1P42126 302 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 EDDM3BP56851 147 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 HERV-K104P61576 105 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 PRB3Q04118 309 aaPredicted RBP5.05□□□□□ -1.6
SSBP1-213ENST00000496622 POU2AF1Q16633 256 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 IAH1Q2TAA2 248 aaPredicted RBP5.05□□□□□ -1.6
SSBP1-213ENST00000496622 COA6Q5JTJ3 125 aaKnown RBP5.05□□□□□ -1.6
SSBP1-213ENST00000496622 C11orf87Q6NUJ2 197 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 SGPP2Q8IWX5 399 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 OR13A1Q8NGR1 328 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 UQCR10Q9UDW1 63 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 CUBNO60494 3623 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 CENPVL3A0A0U1RRI6 287 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 CRYM-AS1A6NIL9 109 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 TAX1BP3O14907 124 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 IGLV2-14P01704 120 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 LYL1P12980 280 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 PPP1CCP36873 323 aaKnown RBP5.05□□□□□ -1.6
SSBP1-213ENST00000496622 PSG9Q00887 426 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 LRRC10Q5BKY1 277 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 CXorf66Q5JRM2 361 aaPredicted RBP5.05□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF497Q6ZNH5 498 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 TBC1D26Q86UD7 250 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF808Q8N4W9 903 aaPredicted RBP5.05□□□□□ -1.6
SSBP1-213ENST00000496622 POC1AQ8NBT0 407 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 CCL17Q92583 94 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 SPATA25Q9BR10 227 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 NPVFQ9HCQ7 196 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 ZNRD1Q9P1U0 126 aa5.05□□□□□ -1.6
SSBP1-213ENST00000496622 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.04□□□□□ -1.6
SSBP1-213ENST00000496622 UMAD1C9J7I0 102 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 C12orf77C9JDV5 145 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 PRDX2P32119 198 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 KLRB1Q12918 225 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 TESK1Q15569 626 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 C12orf54Q6X4T0 127 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FA2HQ7L5A8 372 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A1Q86YD7 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM216BQ8N7L0 139 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms