RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, human

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CXCL12-208	ENST00000496375	DYNLRB2	Q8TF09	96 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	ST6GAL2	Q96JF0	529 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	CXorf58	Q96LI9	332 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	CCDC140	Q96MF4	163 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	PDCD10	Q9BUL8	212 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	HINT2	Q9BX68	163 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	RETN	Q9HD89	108 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	HSPB7	Q9UBY9	170 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	ALG5	Q9Y673	324 aa		10.86	□□□□□ -0.67
CXCL12-208	ENST00000496375	TRBV7-1	A0A0A6YYK4	115 aa		10.85	□□□□□ -0.67
CXCL12-208	ENST00000496375	IFNA17	P01571	189 aa		10.85	□□□□□ -0.67
CXCL12-208	ENST00000496375	EDN2	P20800	178 aa		10.85	□□□□□ -0.67
CXCL12-208	ENST00000496375	ERH	P84090	104 aa	Known RBP	10.85	□□□□□ -0.67
CXCL12-208	ENST00000496375	ZFP69	Q49AA0	526 aa		10.85	□□□□□ -0.67
CXCL12-208	ENST00000496375	ZNF502	Q8TBZ5	544 aa		10.85	□□□□□ -0.67
CXCL12-208	ENST00000496375	MITD1	Q8WV92	249 aa		10.85	□□□□□ -0.67
CXCL12-208	ENST00000496375	NUDT15	Q9NV35	164 aa		10.85	□□□□□ -0.67
CXCL12-208	ENST00000496375	MFSD2B	A6NFX1	497 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	C2orf70	A6NJV1	201 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	ZNF785	A8K8V0	405 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	FAM90A26	D6RGX4	464 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375		K7EIM0	57 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	GGCT	O75223	188 aa	Known RBP	10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	CD7	P09564	240 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	FCGR2B	P31994	310 aa	Predicted RBP	10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	RRAS2	P62070	204 aa	Predicted RBP	10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	TNFRSF9	Q07011	255 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	DEFB114	Q30KQ6	69 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	TCTE3	Q8IZS6	198 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	COQ8A	Q8NI60	647 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	EEF1AKMT3	Q96AZ1	226 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375	HIPK2	Q9H2X6	1198 aa		10.84	□□□□□ -0.67
CXCL12-208	ENST00000496375		I3L2K1	104 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	OR2C1	O95371	312 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	IGHV3-23	P01764	117 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	H2AFB2	P0C5Z0	115 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	RNASE2	P10153	161 aa	Known RBP	10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	FOLR2	P14207	255 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	HOXA1	P49639	335 aa	Predicted RBP	10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	GUCA2B	Q16661	112 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	C4orf46	Q504U0	113 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	DEFB125	Q8N687	156 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	FAM110A	Q9BQ89	295 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	WFDC10A	Q9H1F0	79 aa		10.83	□□□□□ -0.68
CXCL12-208	ENST00000496375	TRAV6	A0A075B6T7	132 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	C7orf66	A4D0T2	115 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375		F8W735	103 aa	Predicted RBP	10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	LGALS9	O00182	355 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	CORT	O00230	105 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	PRAF2	O60831	178 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	IL5	P05113	134 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	ARL3	P36405	182 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	HTR2B	P41595	481 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	SPINK9	Q5DT21	86 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	GGNBP1	Q5YKI7	109 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	SLC25A24	Q6NUK1	477 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	WDR89	Q96FK6	387 aa	Predicted RBP	10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	MED28	Q9H204	178 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	SRD5A3	Q9H8P0	318 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	ZC4H2	Q9NQZ6	224 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	TECR	Q9NZ01	308 aa	Known RBP	10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375		S4R3C0	116 aa		10.82	□□□□□ -0.68
CXCL12-208	ENST00000496375	RBMY1B	A6NDE4	496 aa	Known RBP	10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	RBMY1E	A6NEQ0	496 aa	Known RBP	10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	OR11H12	B2RN74	326 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	RBMY1D	P0C7P1	496 aa	Known RBP	10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	SNCA	P37840	140 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	SUB1	P53999	127 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	ATP5I	P56385	69 aa	Predicted RBP	10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	C2orf83	Q53S99	150 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	CLEC19A	Q6UXS0	136 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	NOXA1	Q86UR1	476 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	GPHB5	Q86YW7	130 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	ZNF431	Q8TF32	576 aa	Predicted RBP	10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	SCARB1	Q8WTV0	552 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	CACNG8	Q8WXS5	425 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	TXN2	Q99757	166 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	ENY2	Q9NPA8	101 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	SELENOK	Q9Y6D0	94 aa		10.81	□□□□□ -0.68
CXCL12-208	ENST00000496375	ADAP1	O75689	374 aa		10.8	□□□□□ -0.68
CXCL12-208	ENST00000496375	HOXB5	P09067	269 aa		10.8	□□□□□ -0.68
CXCL12-208	ENST00000496375	CBLN1	P23435	193 aa		10.8	□□□□□ -0.68
CXCL12-208	ENST00000496375	OR52B4	Q8NGK2	314 aa		10.8	□□□□□ -0.68
CXCL12-208	ENST00000496375	OR1S1	Q8NH92	325 aa		10.8	□□□□□ -0.68
CXCL12-208	ENST00000496375	TMEM170A	Q8WVE7	144 aa		10.8	□□□□□ -0.68
CXCL12-208	ENST00000496375	BSCL2	Q96G97	398 aa	Predicted RBP	10.8	□□□□□ -0.68
CXCL12-208	ENST00000496375	C21orf62	Q9NYP8	219 aa		10.8	□□□□□ -0.68
CXCL12-208	ENST00000496375	ZNF320	A2RRD8	509 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	TMEM213	A2RRL7	107 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	CEBPZOS	A8MTT3	80 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	TGOLN2	O43493	480 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	C1QB	P02746	253 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	FAM106A	Q4KMX7	169 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	SPSB3	Q6PJ21	355 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	SLC24A4	Q8NFF2	622 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	OR4D5	Q8NGN0	318 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	DTD1	Q8TEA8	209 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	RBKS	Q9H477	322 aa		10.79	□□□□□ -0.68
CXCL12-208	ENST00000496375	HEYL	Q9NQ87	328 aa	Predicted RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms