RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 UNC79Q9P2D8 2635 aa12.96□□□□□ -0.33
HLA-A-208ENST00000496081 RBFOX3A6NFN3 312 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 SEC14L6B5MCN3 397 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 J3QLI3 93 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 HMGB3O15347 200 aaKnown RBP12.96□□□□□ -0.34
HLA-A-208ENST00000496081 HLA-DRB1P01911 266 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 TMEM249Q2WGJ8 235 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 ASPHD1Q5U4P2 390 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 ETFRF1Q6IPR1 90 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 RARRES2Q99969 163 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 RASL11BQ9BPW5 248 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 SLC25A33Q9BSK2 321 aa12.96□□□□□ -0.34
HLA-A-208ENST00000496081 EGR2P11161 476 aaPredicted RBP12.95□□□□□ -0.34
HLA-A-208ENST00000496081 CDC34P49427 236 aaPredicted RBP12.95□□□□□ -0.34
HLA-A-208ENST00000496081 HAGHQ16775 308 aa12.95□□□□□ -0.34
HLA-A-208ENST00000496081 MT-CO2P00403 227 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 APOC3P02656 99 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 SFTA3P0C7M3 94 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 GATA2P23769 480 aaPredicted RBP12.94□□□□□ -0.34
HLA-A-208ENST00000496081 RND2P52198 227 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 C10orf91Q5T1B1 145 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 CCDC28AQ8IWP9 274 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 THAP8Q8NA92 274 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 SSX3Q99909 188 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 HSPB9Q9BQS6 159 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 CSMD1Q96PZ7 3565 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 ZANQ9Y493 2812 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 IGKV1D-37A0A075B6S9 117 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 IGHV3-21A0A0B4J1V1 117 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 F8W036 122 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 FBP1P09467 338 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 TMEM219Q86XT9 240 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 TMEM116Q8NCL8 245 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 RBM14Q96PK6 669 aaKnown RBP12.94□□□□□ -0.34
HLA-A-208ENST00000496081 GNG13Q9P2W3 67 aa12.94□□□□□ -0.34
HLA-A-208ENST00000496081 A0A1W2PPV4 95 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 NPIPB5A8MRT5 1133 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 I3L2K1 104 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 PPT1P50897 306 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 CYP2G1PQ6ZSU1 146 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 TTC9CQ8N5M4 171 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 C5orf56Q8N8D9 126 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 OR1L6Q8NGR2 347 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 SEC11CQ9BY50 192 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 TMPRSS5Q9H3S3 457 aa12.93□□□□□ -0.34
HLA-A-208ENST00000496081 FLNBO75369 2602 aaKnown RBP12.93□□□□□ -0.34
HLA-A-208ENST00000496081 ZFP92A6NM28 416 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 ICAM4Q14773 271 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 ZNF506Q5JVG8 444 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 SMDT1Q9H4I9 107 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 SEPSECSQ9HD40 501 aaKnown RBP12.92□□□□□ -0.34
HLA-A-208ENST00000496081 CARHSP1Q9Y2V2 147 aaKnown RBP12.92□□□□□ -0.34
HLA-A-208ENST00000496081 CSPG4Q6UVK1 2322 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 LOC102723971A0A1B0GUV8 181 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 TCRBV4S1A1TA0A5B7 111 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 ZNF90Q03938 601 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 PMS2P11Q13670 270 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 MOB4Q9Y3A3 225 aa12.92□□□□□ -0.34
HLA-A-208ENST00000496081 ITPR2Q14571 2701 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 ZFHX3Q15911 3703 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 PRRC2AP48634 2157 aaKnown RBP12.91□□□□□ -0.34
HLA-A-208ENST00000496081 CREBBPQ92793 2442 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 SH2D7A6NKC9 451 aaPredicted RBP12.91□□□□□ -0.34
HLA-A-208ENST00000496081 H3BUX3 64 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 K7EIM0 57 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 SCO1O75880 301 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 BCL2P10415 239 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 DEFA5Q01523 94 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 SPATA31B1PQ5VZV4 182 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 RXFP4Q8TDU9 374 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 C22orf15Q8WYQ4 148 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 FANCD2OSQ96PS1 177 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 SLC35B3Q9H1N7 401 aa12.91□□□□□ -0.34
HLA-A-208ENST00000496081 PDZD2O15018 2839 aa12.9□□□□□ -0.34
HLA-A-208ENST00000496081 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
HLA-A-208ENST00000496081 AMY1AP04745 511 aa12.9□□□□□ -0.34
HLA-A-208ENST00000496081 RHOBP62745 196 aa12.9□□□□□ -0.34
HLA-A-208ENST00000496081 GUCA2BQ16661 112 aa12.9□□□□□ -0.34
HLA-A-208ENST00000496081 KHDC3LQ587J8 217 aa12.9□□□□□ -0.34
HLA-A-208ENST00000496081 SGMS2Q8NHU3 365 aa12.9□□□□□ -0.34
HLA-A-208ENST00000496081 TNFRSF19Q9NS68 423 aa12.9□□□□□ -0.34
HLA-A-208ENST00000496081 A6NDX4 124 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 LINC01548A6NM66 108 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 ATP6V0E1O15342 81 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 TSPAN9O75954 239 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 HSPB1P04792 205 aaKnown RBP12.89□□□□□ -0.35
HLA-A-208ENST00000496081 STAG3L2P0CL84 134 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 STAG3L3P0CL85 134 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 BPIFB3P59826 476 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 SELENOTP62341 195 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 LY6EQ16553 131 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 SLC35E3Q7Z769 313 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 OR5T1Q8NG75 326 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 TRGV9Q99603 122 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 MDFIC2A0A1B0GVS7 189 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 IFNA1P01562 189 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 SRP19P09132 144 aaKnown RBP12.89□□□□□ -0.35
HLA-A-208ENST00000496081 FAM78BQ5VT40 261 aa12.89□□□□□ -0.35
HLA-A-208ENST00000496081 RBMS3Q6XE24 437 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms