RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 METTL26Q96S19 204 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 DKK2Q9UBU2 259 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 U3KQE9 123 aa9.54□□□□□ -0.88
COL1A1-209ENST00000495677 INS-IGF2F8WCM5 200 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 H3BMM0 161 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 RLN1P04808 185 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 CBX5P45973 191 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 EIF2B2P49770 351 aaKnown RBP9.53□□□□□ -0.88
COL1A1-209ENST00000495677 HSPE1P61604 102 aaKnown RBP9.53□□□□□ -0.88
COL1A1-209ENST00000495677 TBCEQ15813 527 aaPredicted RBP9.53□□□□□ -0.88
COL1A1-209ENST00000495677 TSPAN14Q8NG11 270 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 SEC22AQ96IW7 307 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 NIPSNAP3BQ9BS92 247 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 RHBDL2Q9NX52 303 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 DAPK2Q9UIK4 370 aa9.53□□□□□ -0.88
COL1A1-209ENST00000495677 HELTA6NFD8 242 aa9.52□□□□□ -0.89
COL1A1-209ENST00000495677 HOXA1P49639 335 aaPredicted RBP9.52□□□□□ -0.89
COL1A1-209ENST00000495677 HERV-K104P61576 105 aa9.52□□□□□ -0.89
COL1A1-209ENST00000495677 C22orf42Q6IC83 251 aa9.52□□□□□ -0.89
COL1A1-209ENST00000495677 CMTM1Q8IZ96 169 aa9.52□□□□□ -0.89
COL1A1-209ENST00000495677 C6orf223Q8N319 242 aa9.52□□□□□ -0.89
COL1A1-209ENST00000495677 C15orf53Q8NAA6 179 aa9.52□□□□□ -0.89
COL1A1-209ENST00000495677 NARS2Q96I59 477 aaKnown RBP9.52□□□□□ -0.89
COL1A1-209ENST00000495677 DNAH5Q8TE73 4624 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 TRAV18A0A075B6X5 111 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 CORTO00230 105 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 CLN5O75503 358 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 DHRS2Q13268 280 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 PSMG4Q5JS54 123 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 OR4A16Q8NH70 328 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 LGALS14Q8TCE9 139 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 RFNGQ9Y644 331 aa9.51□□□□□ -0.89
COL1A1-209ENST00000495677 NBDYA0A0U1RRE5 68 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 GPR31O00270 319 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 PPP5CP53041 499 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 SNRPD3P62318 126 aaKnown RBP9.5□□□□□ -0.89
COL1A1-209ENST00000495677 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 C16orf54Q6UWD8 224 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 H2BFWTQ7Z2G1 175 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 OR4X1Q8NH49 305 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 GLMPQ8WWB7 406 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 CLUHP3Q96NS8 147 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 YTHDF1Q9BYJ9 559 aaKnown RBP9.5□□□□□ -0.89
COL1A1-209ENST00000495677 AUNIPQ9H7T9 357 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
COL1A1-209ENST00000495677 DMBT1Q9UGM3 2413 aaPredicted RBP9.49□□□□□ -0.89
COL1A1-209ENST00000495677 TRAV30A0A087WSZ9 112 aa9.49□□□□□ -0.89
COL1A1-209ENST00000495677 SMIM30A4D0T7 59 aa9.49□□□□□ -0.89
COL1A1-209ENST00000495677 RPL5P46777 297 aaKnown RBP9.49□□□□□ -0.89
COL1A1-209ENST00000495677 SFXN4Q6P4A7 337 aa9.49□□□□□ -0.89
COL1A1-209ENST00000495677 TMEM230Q96A57 120 aa9.49□□□□□ -0.89
COL1A1-209ENST00000495677 ZNF2Q9BSG1 426 aaPredicted RBP9.49□□□□□ -0.89
COL1A1-209ENST00000495677 Q9H521 79 aa9.49□□□□□ -0.89
COL1A1-209ENST00000495677 TXNL4BQ9NX01 149 aaKnown RBP9.49□□□□□ -0.89
COL1A1-209ENST00000495677 EHFQ9NZC4 300 aa9.49□□□□□ -0.89
COL1A1-209ENST00000495677 RAB26Q9ULW5 256 aa9.49□□□□□ -0.89
COL1A1-209ENST00000495677 TMED3Q9Y3Q3 217 aa9.49□□□□□ -0.89
COL1A1-209ENST00000495677 FAM90A26D6RGX4 464 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 SCGB2A1O75556 95 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 IGKV1-39P01597 117 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 IGKV1-17P01599 117 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 IGKV1D-39P04432 117 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 SNCAP37840 140 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 NKX2-1P43699 371 aaPredicted RBP9.48□□□□□ -0.89
COL1A1-209ENST00000495677 RFX2P48378 723 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 SUB1P53999 127 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL1A1-209ENST00000495677 TMEM88Q6PEY1 159 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 SLC25A38Q96DW6 304 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 FNDC4Q9H6D8 234 aaPredicted RBP9.48□□□□□ -0.89
COL1A1-209ENST00000495677 DIABLOQ9NR28 239 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 ANAPC10Q9UM13 185 aa9.48□□□□□ -0.89
COL1A1-209ENST00000495677 HNRNPCP07910 306 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL1A1-209ENST00000495677 NAT1P18440 290 aa9.47□□□□□ -0.89
COL1A1-209ENST00000495677 ALDH3B2P48448 385 aa9.47□□□□□ -0.89
COL1A1-209ENST00000495677 EMP1P54849 157 aa9.47□□□□□ -0.89
COL1A1-209ENST00000495677 LPCAT3Q6P1A2 487 aa9.47□□□□□ -0.89
COL1A1-209ENST00000495677 OR5H6Q8NGV6 325 aa9.47□□□□□ -0.89
COL1A1-209ENST00000495677 OR6F1Q8NGZ6 308 aa9.47□□□□□ -0.89
COL1A1-209ENST00000495677 NRN1Q9NPD7 142 aa9.47□□□□□ -0.89
COL1A1-209ENST00000495677 MRPL36Q9P0J6 103 aaKnown RBP9.47□□□□□ -0.89
COL1A1-209ENST00000495677 BLOC1S6Q9UL45 172 aa9.47□□□□□ -0.89
COL1A1-209ENST00000495677 FCER2P06734 321 aa9.46□□□□□ -0.9
COL1A1-209ENST00000495677 RNASE2P10153 161 aaKnown RBP9.46□□□□□ -0.9
COL1A1-209ENST00000495677 S100GP29377 79 aa9.46□□□□□ -0.9
COL1A1-209ENST00000495677 SPATA12Q7Z6I5 190 aa9.46□□□□□ -0.9
COL1A1-209ENST00000495677 ATG101Q9BSB4 218 aa9.46□□□□□ -0.9
COL1A1-209ENST00000495677 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
COL1A1-209ENST00000495677 BUB3O43684 328 aa9.45□□□□□ -0.9
COL1A1-209ENST00000495677 TMEM127O75204 238 aa9.45□□□□□ -0.9
COL1A1-209ENST00000495677 YPEL3P61236 119 aaPredicted RBP9.45□□□□□ -0.9
COL1A1-209ENST00000495677 MLANAQ16655 118 aa9.45□□□□□ -0.9
COL1A1-209ENST00000495677 BSXQ3C1V8 233 aa9.45□□□□□ -0.9
COL1A1-209ENST00000495677 Q8WTZ3 238 aa9.45□□□□□ -0.9
COL1A1-209ENST00000495677 FXYD6Q9H0Q3 95 aa9.45□□□□□ -0.9
COL1A1-209ENST00000495677 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
COL1A1-209ENST00000495677 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
COL1A1-209ENST00000495677 HTN3P15516 51 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms