RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 INS-IGF2F8WCM5 200 aa12.63□□□□□ -0.39
TMEM53-209ENST00000495630 M0R2N4 97 aa12.63□□□□□ -0.39
TMEM53-209ENST00000495630 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
TMEM53-209ENST00000495630 KCTD21Q4G0X4 260 aa12.63□□□□□ -0.39
TMEM53-209ENST00000495630 DCANP1Q8TF63 244 aa12.63□□□□□ -0.39
TMEM53-209ENST00000495630 NARS2Q96I59 477 aaKnown RBP12.63□□□□□ -0.39
TMEM53-209ENST00000495630 RAB40CQ96S21 281 aa12.63□□□□□ -0.39
TMEM53-209ENST00000495630 CLEC5AQ9NY25 188 aa12.63□□□□□ -0.39
TMEM53-209ENST00000495630 CELA1Q9UNI1 258 aa12.63□□□□□ -0.39
TMEM53-209ENST00000495630 DNAH2Q9P225 4427 aa12.63□□□□□ -0.39
TMEM53-209ENST00000495630 AGRNO00468 2067 aa12.62□□□□□ -0.39
TMEM53-209ENST00000495630 LOC100506127A0A0U1RQW1 187 aa12.62□□□□□ -0.39
TMEM53-209ENST00000495630 CORTO00230 105 aa12.62□□□□□ -0.39
TMEM53-209ENST00000495630 P2RY1P47900 373 aa12.62□□□□□ -0.39
TMEM53-209ENST00000495630 TMEM230Q96A57 120 aa12.62□□□□□ -0.39
TMEM53-209ENST00000495630 MRGPRFQ96AM1 343 aa12.62□□□□□ -0.39
TMEM53-209ENST00000495630 YTHDF1Q9BYJ9 559 aaKnown RBP12.62□□□□□ -0.39
TMEM53-209ENST00000495630 CLN5O75503 358 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 PRSS3P35030 304 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 HRH1P35367 487 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 EIF2B2P49770 351 aaKnown RBP12.61□□□□□ -0.39
TMEM53-209ENST00000495630 UCP3P55916 312 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 NUTF2P61970 127 aaKnown RBP12.61□□□□□ -0.39
TMEM53-209ENST00000495630 TSPAN5P62079 268 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 TMEM69Q5SWH9 247 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 ZNF767PQ75MW2 155 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 CROCCP3Q8IVE0 287 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 C1QTNF4Q9BXJ3 329 aa12.61□□□□□ -0.39
TMEM53-209ENST00000495630 DNAH17Q9UFH2 4485 aa12.6□□□□□ -0.39
TMEM53-209ENST00000495630 SCGB2A1O75556 95 aa12.6□□□□□ -0.39
TMEM53-209ENST00000495630 HLA-DMAP28067 261 aa12.6□□□□□ -0.39
TMEM53-209ENST00000495630 RPL5P46777 297 aaKnown RBP12.6□□□□□ -0.39
TMEM53-209ENST00000495630 PPP5CP53041 499 aa12.6□□□□□ -0.39
TMEM53-209ENST00000495630 TAS2R20P59543 309 aa12.6□□□□□ -0.39
TMEM53-209ENST00000495630 SPINK9Q5DT21 86 aa12.6□□□□□ -0.39
TMEM53-209ENST00000495630 UBE2NLQ5JXB2 153 aa12.6□□□□□ -0.39
TMEM53-209ENST00000495630 OR4X1Q8NH49 305 aa12.6□□□□□ -0.39
TMEM53-209ENST00000495630 TRAV30A0A087WSZ9 112 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 HELTA6NFD8 242 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 IFNA10P01566 189 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 IFNA21P01568 189 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 IFNA17P01571 189 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 AP2S1P53680 142 aaPredicted RBP12.59□□□□□ -0.39
TMEM53-209ENST00000495630 DHRS2Q13268 280 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 MLANAQ16655 118 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 SLC35G3Q8N808 338 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 U3KQE9 123 aa12.59□□□□□ -0.39
TMEM53-209ENST00000495630 A0A0B4J293 547 aa12.58□□□□□ -0.4
TMEM53-209ENST00000495630 RNASE2P10153 161 aaKnown RBP12.58□□□□□ -0.4
TMEM53-209ENST00000495630 IZUMO4Q1ZYL8 232 aa12.58□□□□□ -0.4
TMEM53-209ENST00000495630 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
TMEM53-209ENST00000495630 FAM210BQ96KR6 192 aa12.58□□□□□ -0.4
TMEM53-209ENST00000495630 SCRT1Q9BWW7 348 aa12.58□□□□□ -0.4
TMEM53-209ENST00000495630 FNDC4Q9H6D8 234 aaPredicted RBP12.58□□□□□ -0.4
TMEM53-209ENST00000495630 SEPSECSQ9HD40 501 aaKnown RBP12.58□□□□□ -0.4
TMEM53-209ENST00000495630 MRPL36Q9P0J6 103 aaKnown RBP12.58□□□□□ -0.4
TMEM53-209ENST00000495630 IGKV1-17P01599 117 aa12.57□□□□□ -0.4
TMEM53-209ENST00000495630 SPART-AS1P0CW21 52 aa12.57□□□□□ -0.4
TMEM53-209ENST00000495630 Q6ZR54 194 aa12.57□□□□□ -0.4
TMEM53-209ENST00000495630 SAMD12Q8N8I0 201 aa12.57□□□□□ -0.4
TMEM53-209ENST00000495630 GPX8Q8TED1 209 aa12.57□□□□□ -0.4
TMEM53-209ENST00000495630 NEU1Q99519 415 aa12.57□□□□□ -0.4
TMEM53-209ENST00000495630 XCL2Q9UBD3 114 aa12.57□□□□□ -0.4
TMEM53-209ENST00000495630 TMEM189A5PLL7 270 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 ATG12O94817 140 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 IGKV1-5P01602 117 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 CD74P04233 296 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 OPRK1P41145 380 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 ETV6P41212 452 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
TMEM53-209ENST00000495630 SOHLH1Q5JUK2 328 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 C16orf54Q6UWD8 224 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 GLMPQ8WWB7 406 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 PDCD10Q9BUL8 212 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 KRTAP4-5Q9BYR2 181 aa12.56□□□□□ -0.4
TMEM53-209ENST00000495630 SMIM9A6NGZ8 99 aa12.55□□□□□ -0.4
TMEM53-209ENST00000495630 H3BMM0 161 aa12.55□□□□□ -0.4
TMEM53-209ENST00000495630 P0C879 139 aa12.55□□□□□ -0.4
TMEM53-209ENST00000495630 RND3P61587 244 aa12.55□□□□□ -0.4
TMEM53-209ENST00000495630 TIGITQ495A1 244 aa12.55□□□□□ -0.4
TMEM53-209ENST00000495630 Q8WTZ3 238 aa12.55□□□□□ -0.4
TMEM53-209ENST00000495630 ENY2Q9NPA8 101 aa12.55□□□□□ -0.4
TMEM53-209ENST00000495630 HNRNPCP07910 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMEM53-209ENST00000495630 RPS19P39019 145 aaKnown RBP12.54□□□□□ -0.4
TMEM53-209ENST00000495630 RNF212Q495C1 297 aa12.54□□□□□ -0.4
TMEM53-209ENST00000495630 ZNF705AQ6ZN79 300 aaPredicted RBP12.54□□□□□ -0.4
TMEM53-209ENST00000495630 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
TMEM53-209ENST00000495630 ZNF486Q96H40 463 aaPredicted RBP12.54□□□□□ -0.4
TMEM53-209ENST00000495630 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
TMEM53-209ENST00000495630 DYNC1H1Q14204 4646 aaKnown RBP12.54□□□□□ -0.4
TMEM53-209ENST00000495630 DNAH11Q96DT5 4516 aa12.53□□□□□ -0.4
TMEM53-209ENST00000495630 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
TMEM53-209ENST00000495630 RPS10-NUDT3A0A1W2PQS6 291 aa12.53□□□□□ -0.4
TMEM53-209ENST00000495630 FAM90A26D6RGX4 464 aa12.53□□□□□ -0.4
TMEM53-209ENST00000495630 HOXA1P49639 335 aaPredicted RBP12.53□□□□□ -0.4
TMEM53-209ENST00000495630 AKR1C2P52895 323 aa12.53□□□□□ -0.4
TMEM53-209ENST00000495630 YPEL3P61236 119 aaPredicted RBP12.53□□□□□ -0.4
TMEM53-209ENST00000495630 BSXQ3C1V8 233 aa12.53□□□□□ -0.4
TMEM53-209ENST00000495630 Q6ZRM9 215 aa12.53□□□□□ -0.4
TMEM53-209ENST00000495630 OR1S2Q8NGQ3 325 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms