RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 Q6ZT83 130 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 ZNF329Q86UD4 541 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 CLEC5AQ9NY25 188 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 CLCF1Q9UBD9 225 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 PRR31Q5SQ13 230 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 MBNL2Q5VZF2 373 aaKnown RBP12.48□□□□□ -0.41
SDF4-207ENST00000494748 OR2D3Q8NGH3 330 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 SPOCK3Q9BQ16 436 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 PLEKHA3Q9HB20 300 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 ENY2Q9NPA8 101 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 ABI3Q9P2A4 366 aa12.48□□□□□ -0.41
SDF4-207ENST00000494748 TRGV5A0A0B4J1U4 118 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 SH2D7A6NKC9 451 aaPredicted RBP12.47□□□□□ -0.41
SDF4-207ENST00000494748 J3QR06 171 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 HSBP1O75506 76 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.47□□□□□ -0.41
SDF4-207ENST00000494748 SAP30LQ9HAJ7 183 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 GPR179Q6PRD1 2367 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 TEX50A0A1B0GTY4 177 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 UPK2O00526 184 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 CER1O95813 267 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 TAS2R45P59539 299 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 RHOGP84095 191 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 LOXL4Q96JB6 756 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 ZPBPQ9BS86 351 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
SDF4-207ENST00000494748 IGKV1-16P04430 117 aa12.46□□□□□ -0.41
SDF4-207ENST00000494748 C1RLQ9NZP8 487 aa12.46□□□□□ -0.41
SDF4-207ENST00000494748 CNOT1A5YKK6 2376 aaKnown RBP12.46□□□□□ -0.41
SDF4-207ENST00000494748 KLRC4-KLRK1H3BQV0 150 aa12.46□□□□□ -0.41
SDF4-207ENST00000494748 PYYP10082 97 aa12.46□□□□□ -0.41
SDF4-207ENST00000494748 MYCNOSP40205 109 aa12.46□□□□□ -0.41
SDF4-207ENST00000494748 RNASEKQ6P5S7 137 aaKnown RBP12.46□□□□□ -0.41
SDF4-207ENST00000494748 LINC00173Q6ZV60 143 aa12.46□□□□□ -0.41
SDF4-207ENST00000494748 MRPL32Q9BYC8 188 aaKnown RBP12.46□□□□□ -0.41
SDF4-207ENST00000494748 ASPMQ8IZT6 3477 aa12.46□□□□□ -0.41
SDF4-207ENST00000494748 SMG1Q96Q15 3661 aaKnown RBP12.46□□□□□ -0.41
SDF4-207ENST00000494748 TAX1BP3O14907 124 aa12.46□□□□□ -0.42
SDF4-207ENST00000494748 IGLV1-44P01699 117 aa12.46□□□□□ -0.42
SDF4-207ENST00000494748 DUX4L9Q6RFH8 374 aaPredicted RBP12.46□□□□□ -0.42
SDF4-207ENST00000494748 PRNDQ9UKY0 176 aa12.46□□□□□ -0.42
SDF4-207ENST00000494748 CD69Q07108 199 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 LRRC10Q5BKY1 277 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 PATE2Q6UY27 113 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 ST6GALNAC6Q969X2 333 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 AMMECR1Q9Y4X0 333 aaPredicted RBP12.45□□□□□ -0.42
SDF4-207ENST00000494748 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 CFHR2P36980 270 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 UBE2L3P68036 154 aaKnown RBP12.45□□□□□ -0.42
SDF4-207ENST00000494748 OR10W1Q8NGF6 305 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 OR1L8Q8NGR8 309 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 ZNF714Q96N38 554 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 OR2V2Q96R30 315 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
SDF4-207ENST00000494748 TRAV30A0A087WSZ9 112 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 PEX7O00628 323 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 LHBP01229 141 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 OR2Z1Q8NG97 314 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 M0QZ24 198 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 CT45A6P0DMU7 189 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 CT45A5P0DMU8 189 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 CT45A7P0DMV0 189 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 MPV17L2Q567V2 206 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 OR2T6Q8NHC8 308 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 FXYD5Q96DB9 178 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 TRIB1Q96RU8 372 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 ZNF835Q9Y2P0 537 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 IGHV1-18A0A0C4DH31 117 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 KBTBD11-OT1A0A1B0GTJ5 212 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 CA7P43166 264 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 LINC00322Q6ZN03 302 aaPredicted RBP12.44□□□□□ -0.42
SDF4-207ENST00000494748 ERASQ7Z444 233 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 TMEM70Q9BUB7 260 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 ZNRD1Q9P1U0 126 aa12.44□□□□□ -0.42
SDF4-207ENST00000494748 IGHV1-24A0A0C4DH33 117 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 PPBPP02775 128 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 CD24P25063 80 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 VWA1Q6PCB0 445 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 E7EUB6 86 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 KIR2DL2P43627 348 aaPredicted RBP12.43□□□□□ -0.42
SDF4-207ENST00000494748 ATP5L2Q7Z4Y8 100 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 NCOR1P1Q9H4R4 102 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 TRIOBPQ9H2D6 2365 aa12.43□□□□□ -0.42
SDF4-207ENST00000494748 IGKV1D-37A0A075B6S9 117 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 OR4C46A6NHA9 309 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 ST20Q9HBF5 79 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
SDF4-207ENST00000494748 hDV102S1A0JD36 115 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 GNG5P63218 68 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 BVES-AS1Q5T3Y7 98 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 GSX1Q9H4S2 264 aaPredicted RBP12.42□□□□□ -0.42
SDF4-207ENST00000494748 ARFGEF3Q5TH69 2177 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 CAMPP49913 170 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 FAM201AQ5SY85 155 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 SSX8Q7RTT4 187 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 GTSF1Q8WW33 167 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 ADTRPQ96IZ2 230 aa12.42□□□□□ -0.42
SDF4-207ENST00000494748 INTS1Q8N201 2190 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms