RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 ZNF503Q96F45 646 aa8.45□□□□□ -1.06
PRPF4B-209ENST00000494674 SDF2L1Q9HCN8 221 aa8.45□□□□□ -1.06
PRPF4B-209ENST00000494674 FUT9Q9Y231 359 aa8.45□□□□□ -1.06
PRPF4B-209ENST00000494674 F11RQ9Y624 299 aaKnown RBP8.45□□□□□ -1.06
PRPF4B-209ENST00000494674 SVEP1Q4LDE5 3571 aa8.45□□□□□ -1.06
PRPF4B-209ENST00000494674 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
PRPF4B-209ENST00000494674 A0A087WWC5 75 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 C11orf94C9JXX5 98 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 FOXH1O75593 365 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 ATP5G3P48201 142 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 UBE2E1P51965 193 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 RND2P52198 227 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 C5orf64Q2M2E5 130 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 CCDC144NLQ6NUI1 221 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 C15orf54Q8N8G6 183 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 OR4F5Q8NH21 305 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 TMEM37Q8WXS4 190 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 HIST1H2BAQ96A08 127 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 ISOC2Q96AB3 205 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 OR4F4Q96R69 305 aa8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 SRSF8Q9BRL6 282 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 TBL2Q9Y4P3 447 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 ANKRD17O75179 2603 aaKnown RBP8.44□□□□□ -1.06
PRPF4B-209ENST00000494674 TCRBV4S1A1TA0A5B7 111 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 UBE2G2P60604 165 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 ZNF90Q03938 601 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 FAM78BQ5VT40 261 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 OR2T10Q8NGZ9 312 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 FAM168AQ92567 244 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 MISP3Q96FF7 219 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 SMIM7Q9BQ49 75 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 PARLQ9H300 379 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 YTHDF2Q9Y5A9 579 aaKnown RBP8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 ZNF727A8MUV8 499 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 CTRB1P17538 263 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 NDPQ00604 133 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 PAX8Q06710 450 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 PNRC1Q12796 327 aaPredicted RBP8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 PLGLAQ15195 96 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 MORN5Q5VZ52 161 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 CTRB2Q6GPI1 263 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 PATE2Q6UY27 113 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 TMEM116Q8NCL8 245 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 OR51G1Q8NGK1 321 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 RPUSD4Q96CM3 377 aaKnown RBP8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 FAM167A-AS1Q96KT0 104 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 PIMREGQ9BSJ6 248 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 SLC25A33Q9BSK2 321 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 C19orf24Q9BVV8 132 aa8.43□□□□□ -1.06
PRPF4B-209ENST00000494674 IGHV4-30-2A0A087WSY4 118 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 B4DEV8 164 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 I3L2K1 104 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 NDUFS8O00217 210 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 CORTO00230 105 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 CRYBA1P05813 215 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 FOLR2P14207 255 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 SAA4P35542 130 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 HES1Q14469 280 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 ASPHD1Q5U4P2 390 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 ETFRF1Q6IPR1 90 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 NRGNQ92686 78 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 MALSU1Q96EH3 234 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 LPAR2Q9HBW0 351 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 NAT8Q9UHE5 227 aa8.42□□□□□ -1.06
PRPF4B-209ENST00000494674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.41□□□□□ -1.064e-10■■■■□ 25.3
PRPF4B-209ENST00000494674 CHD6Q8TD26 2715 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 CSMD2Q7Z408 3487 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 PDE6DO43924 150 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 OR2C1O95371 312 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 MT-CO2P00403 227 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 PAX1P15863 534 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 ATP5J2P56134 94 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 SELENOTP62341 195 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 KIAA0141Q14154 515 aaPredicted RBP8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 FXYD3Q14802 87 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 ZNF674Q2M3X9 581 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 FAM120AOSQ5T036 256 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 CST9LP1Q5W188 147 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 TRGV9Q99603 122 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 TXNDC17Q9BRA2 123 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 MRPL32Q9BYC8 188 aaKnown RBP8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 TECRQ9NZ01 308 aaKnown RBP8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 KMT2BQ9UMN6 2715 aaPredicted RBP8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 USP9YO00507 2555 aaPredicted RBP8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 POLQO75417 2590 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 TENM4Q6N022 2769 aa8.41□□□□□ -1.06
PRPF4B-209ENST00000494674 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 CENPVL3A0A0U1RRI6 287 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 F6UZH7 168 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 K7EIM0 57 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 NPFFO15130 113 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 CLN5O75503 358 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 CNIH1O95406 144 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 MT-ND4LP03901 98 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 RPL23P62829 140 aaKnown RBP8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 TMEM241Q24JQ0 296 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 ZNF562Q6V9R5 426 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 FAM24BQ8N5W8 94 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 NANPQ8TBE9 248 aa8.4□□□□□ -1.06
PRPF4B-209ENST00000494674 SSX3Q99909 188 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms