RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 COQ2Q96H96 371 aa16.77■□□□□ 0.28
RNF40-203ENST00000493683 LINC00587B1AMM8 73 aa16.77■□□□□ 0.28
RNF40-203ENST00000493683 SLC25A20O43772 301 aa16.77■□□□□ 0.28
RNF40-203ENST00000493683 KIR3DL3Q8N743 410 aa16.77■□□□□ 0.28
RNF40-203ENST00000493683 DUTP33316 252 aaKnown RBP16.77■□□□□ 0.27
RNF40-203ENST00000493683 FAM201AQ5SY85 155 aa16.77■□□□□ 0.27
RNF40-203ENST00000493683 IGHV3OR16-10A0A075B7F0 116 aa16.77■□□□□ 0.27
RNF40-203ENST00000493683 HSD52Q0P140 79 aa16.77■□□□□ 0.27
RNF40-203ENST00000493683 TRGV11A0A075B6L2 103 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 FAM71F2Q6NXP2 309 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 PLNP26678 52 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 C8orf46Q8TAG6 207 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 TMEM167AQ8TBQ9 72 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 OVOL1O14753 267 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 ZNF585BQ52M93 769 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 ZNF837Q96EG3 531 aaPredicted RBP16.76■□□□□ 0.27
RNF40-203ENST00000493683 FOXL1Q12952 345 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 FBLN7Q53RD9 439 aa16.76■□□□□ 0.27
RNF40-203ENST00000493683 SSBP4Q9BWG4 385 aaPredicted RBP16.76■□□□□ 0.27
RNF40-203ENST00000493683 A0A0G2JMM0 328 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 A0A1W2PPB8 328 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 A0A1W2PRS3 328 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 KIR3DP1A8MWS1 328 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 PAQR4Q8N4S7 273 aaPredicted RBP16.75■□□□□ 0.27
RNF40-203ENST00000493683 OR9G4Q8NGQ1 327 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 OCC1Q8TAD7 63 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 RNASE6Q93091 150 aaKnown RBP16.75■□□□□ 0.27
RNF40-203ENST00000493683 S4R3C0 116 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 HOXA3O43365 443 aaPredicted RBP16.75■□□□□ 0.27
RNF40-203ENST00000493683 TDGF1P13385 188 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 NPFFR1Q9GZQ6 430 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 TRAV8-2A0A0B4J237 113 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 GNG5P63218 68 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 PGPEP1Q9NXJ5 209 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 TBX6O95947 436 aaPredicted RBP16.75■□□□□ 0.27
RNF40-203ENST00000493683 IGKCP01834 107 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 UMODP07911 640 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 OR2K2Q8NGT1 345 aa16.75■□□□□ 0.27
RNF40-203ENST00000493683 NHP2Q9NX24 153 aaKnown RBP16.75■□□□□ 0.27
RNF40-203ENST00000493683 C9orf106Q8NAJ2 232 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 SLC25A48Q6ZT89 311 aaKnown RBP16.74■□□□□ 0.27
RNF40-203ENST00000493683 TOMM7Q9P0U1 55 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 TRGV2A0A075B6R0 118 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 NAPSAO96009 420 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 RSPO4Q2I0M5 234 aaPredicted RBP16.74■□□□□ 0.27
RNF40-203ENST00000493683 ERVK11-1P61568 191 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 LHFPL1Q86WI0 220 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 CHTOPQ9Y3Y2 248 aaKnown RBP16.74■□□□□ 0.27
RNF40-203ENST00000493683 ANKRD36A6QL64 1941 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 MUC21A0A0G2JKD1 596 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 MUC21A0A140T8X8 626 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 CD7P09564 240 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 SRSF3P84103 164 aaKnown RBP16.74■□□□□ 0.27
RNF40-203ENST00000493683 MUC21Q5SSG8 566 aa16.74■□□□□ 0.27
RNF40-203ENST00000493683 COL4A5P29400 1685 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 TMEM42Q69YG0 159 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 ST6GALNAC3Q8NDV1 305 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 CRYGSP22914 178 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 PAX2Q02962 417 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 HIST1H2BLQ99880 126 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 OR9G9P0C7N8 305 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 C7orf69Q9H7B7 122 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 LY96Q9Y6Y9 160 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 LRRC37AA6NMS7 1700 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 CELA3BP08861 270 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 LINC00469Q8N7U9 141 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 WFDC1Q9HC57 220 aa16.73■□□□□ 0.27
RNF40-203ENST00000493683 TNFSF13O75888 250 aa16.72■□□□□ 0.27
RNF40-203ENST00000493683 LDLRAD4O15165 306 aa16.72■□□□□ 0.27
RNF40-203ENST00000493683 RAMP3O60896 148 aa16.72■□□□□ 0.27
RNF40-203ENST00000493683 CCL3L1P16619 93 aa16.72■□□□□ 0.27
RNF40-203ENST00000493683 IFI27L1Q96BM0 104 aa16.72■□□□□ 0.27
RNF40-203ENST00000493683 VKORC1Q9BQB6 163 aa16.72■□□□□ 0.27
RNF40-203ENST00000493683 TIMP3P35625 211 aa16.71■□□□□ 0.27
RNF40-203ENST00000493683 SLC25A15Q9Y619 301 aa16.71■□□□□ 0.27
RNF40-203ENST00000493683 PRSS22Q9GZN4 317 aa16.71■□□□□ 0.27
RNF40-203ENST00000493683 C11orf68Q9H3H3 251 aaKnown RBP16.71■□□□□ 0.27
RNF40-203ENST00000493683 COL4A1P02462 1669 aa16.71■□□□□ 0.27
RNF40-203ENST00000493683 HIST3H2BBQ8N257 126 aa16.71■□□□□ 0.27
RNF40-203ENST00000493683 RNF5Q99942 180 aa16.71■□□□□ 0.27
RNF40-203ENST00000493683 COL11A2P13942 1736 aaPredicted RBP16.71■□□□□ 0.27
RNF40-203ENST00000493683 A0A0A6YYD4 124 aa16.7■□□□□ 0.26
RNF40-203ENST00000493683 FLVCR1-AS1Q8TAF5 88 aa16.7■□□□□ 0.26
RNF40-203ENST00000493683 PYYP10082 97 aa16.7■□□□□ 0.26
RNF40-203ENST00000493683 GFI1Q99684 422 aa16.7■□□□□ 0.26
RNF40-203ENST00000493683 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
RNF40-203ENST00000493683 LDLRAD2Q5SZI1 272 aa16.7■□□□□ 0.26
RNF40-203ENST00000493683 DMRTA2Q96SC8 542 aa16.7■□□□□ 0.26
RNF40-203ENST00000493683 PARP14Q460N5 1801 aa16.7■□□□□ 0.26
RNF40-203ENST00000493683 CMC4P56277 68 aaPredicted RBP16.7■□□□□ 0.26
RNF40-203ENST00000493683 COLCA1Q6ZS62 124 aa16.7■□□□□ 0.26
RNF40-203ENST00000493683 MRPL52Q86TS9 123 aaKnown RBP16.7■□□□□ 0.26
RNF40-203ENST00000493683 A8MWV9 139 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 RHOGP84095 191 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 TREML4Q6UXN2 200 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 ABHD17AQ96GS6 310 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 CD55P08174 381 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 MALP21145 153 aa16.69■□□□□ 0.26
RNF40-203ENST00000493683 CSRP1P21291 193 aaKnown RBP16.69■□□□□ 0.26
RNF40-203ENST00000493683 CFHR1Q03591 330 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms