RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 MIFP14174 115 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 TMEM41BQ5BJD5 291 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 STXBP6Q8NFX7 210 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 GRAMD2BQ96HH9 432 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 METTL26Q96S19 204 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 COMMD3Q9UBI1 195 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 DNAH6Q9C0G6 4158 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 A0A1W2PS18 150 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 KNCNA6PVL3 124 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 ZNF705EA8MWA4 302 aaPredicted RBP12.59□□□□□ -0.39
COL9A1-210ENST00000493682 CLN5O75503 358 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 IFNA17P01571 189 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 APOA1P02647 267 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 ZNF688P0C7X2 276 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 PI3P19957 117 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 C4BPBP20851 252 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 CRYBB3P26998 211 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 ETV6P41212 452 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 P2RY1P47900 373 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 PPP5CP53041 499 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL9A1-210ENST00000493682 RND3P61587 244 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 MLANAQ16655 118 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 MORN3Q6PF18 240 aaPredicted RBP12.59□□□□□ -0.39
COL9A1-210ENST00000493682 TP53RKQ96S44 253 aa12.59□□□□□ -0.39
COL9A1-210ENST00000493682 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
COL9A1-210ENST00000493682 PGAM2P15259 253 aa12.58□□□□□ -0.4
COL9A1-210ENST00000493682 AKR1C2P52895 323 aa12.58□□□□□ -0.4
COL9A1-210ENST00000493682 PIGPP57054 158 aa12.58□□□□□ -0.4
COL9A1-210ENST00000493682 Q6ZTC4 211 aa12.58□□□□□ -0.4
COL9A1-210ENST00000493682 OR4X1Q8NH49 305 aa12.58□□□□□ -0.4
COL9A1-210ENST00000493682 ZNF486Q96H40 463 aaPredicted RBP12.58□□□□□ -0.4
COL9A1-210ENST00000493682 X6R8D5 127 aa12.58□□□□□ -0.4
COL9A1-210ENST00000493682 ELOA3CA0A087WX78 387 aaPredicted RBP12.57□□□□□ -0.4
COL9A1-210ENST00000493682 TRAV10A0A0B4J240 114 aa12.57□□□□□ -0.4
COL9A1-210ENST00000493682 OPRK1P41145 380 aa12.57□□□□□ -0.4
COL9A1-210ENST00000493682 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
COL9A1-210ENST00000493682 ACTL10Q5JWF8 245 aa12.57□□□□□ -0.4
COL9A1-210ENST00000493682 LHFPL1Q86WI0 220 aa12.57□□□□□ -0.4
COL9A1-210ENST00000493682 DCANP1Q8TF63 244 aa12.57□□□□□ -0.4
COL9A1-210ENST00000493682 TMEM230Q96A57 120 aa12.57□□□□□ -0.4
COL9A1-210ENST00000493682 PDCD10Q9BUL8 212 aa12.57□□□□□ -0.4
COL9A1-210ENST00000493682 CLEC5AQ9NY25 188 aa12.57□□□□□ -0.4
COL9A1-210ENST00000493682 KIAA1109Q2LD37 5005 aa12.56□□□□□ -0.4
COL9A1-210ENST00000493682 IGHV4-4A0A075B6R2 117 aa12.56□□□□□ -0.4
COL9A1-210ENST00000493682 ATG12O94817 140 aa12.56□□□□□ -0.4
COL9A1-210ENST00000493682 IGKV1-17P01599 117 aa12.56□□□□□ -0.4
COL9A1-210ENST00000493682 ELK1P19419 428 aa12.56□□□□□ -0.4
COL9A1-210ENST00000493682 RPL5P46777 297 aaKnown RBP12.56□□□□□ -0.4
COL9A1-210ENST00000493682 CSNK1G2-AS1Q8NCQ2 148 aa12.56□□□□□ -0.4
COL9A1-210ENST00000493682 NARS2Q96I59 477 aaKnown RBP12.56□□□□□ -0.4
COL9A1-210ENST00000493682 ENY2Q9NPA8 101 aa12.56□□□□□ -0.4
COL9A1-210ENST00000493682 AGRNO00468 2067 aa12.56□□□□□ -0.4
COL9A1-210ENST00000493682 C3orf85A0A1B0GTC6 90 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 HPGDSO60760 199 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 SCGB2A1O75556 95 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 NCS1P62166 190 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 TRIM16LQ309B1 348 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 BSXQ3C1V8 233 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 SP6Q3SY56 376 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 TIGITQ495A1 244 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 CENPSQ8N2Z9 138 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 TBC1D24Q9ULP9 559 aa12.55□□□□□ -0.4
COL9A1-210ENST00000493682 A0A0G2JRQ6 117 aa12.54□□□□□ -0.4
COL9A1-210ENST00000493682 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
COL9A1-210ENST00000493682 RNASE10Q5GAN6 216 aaKnown RBP12.54□□□□□ -0.4
COL9A1-210ENST00000493682 RAB40CQ96S21 281 aa12.54□□□□□ -0.4
COL9A1-210ENST00000493682 RNF126Q9BV68 326 aa12.54□□□□□ -0.4
COL9A1-210ENST00000493682 VCX3AQ9NNX9 186 aa12.54□□□□□ -0.4
COL9A1-210ENST00000493682 KLK11Q9UBX7 282 aa12.54□□□□□ -0.4
COL9A1-210ENST00000493682 CELA1Q9UNI1 258 aa12.54□□□□□ -0.4
COL9A1-210ENST00000493682 U3KQE9 123 aa12.54□□□□□ -0.4
COL9A1-210ENST00000493682 TRAV30A0A087WSZ9 112 aa12.53□□□□□ -0.4
COL9A1-210ENST00000493682 CD3DP04234 171 aa12.53□□□□□ -0.4
COL9A1-210ENST00000493682 DHRS2Q13268 280 aa12.53□□□□□ -0.4
COL9A1-210ENST00000493682 PSMG4Q5JS54 123 aa12.53□□□□□ -0.4
COL9A1-210ENST00000493682 Q6ZRM9 215 aa12.53□□□□□ -0.4
COL9A1-210ENST00000493682 LINC00336Q6ZUF6 198 aa12.53□□□□□ -0.4
COL9A1-210ENST00000493682 ARRDC1Q8N5I2 433 aa12.53□□□□□ -0.4
COL9A1-210ENST00000493682 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
COL9A1-210ENST00000493682 A0A087WXM4 84 aa12.52□□□□□ -0.41
COL9A1-210ENST00000493682 HELTA6NFD8 242 aa12.52□□□□□ -0.41
COL9A1-210ENST00000493682 UCP1P25874 307 aa12.52□□□□□ -0.41
COL9A1-210ENST00000493682 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.41
COL9A1-210ENST00000493682 C12orf74Q32Q52 190 aa12.52□□□□□ -0.41
COL9A1-210ENST00000493682 C16orf54Q6UWD8 224 aa12.52□□□□□ -0.41
COL9A1-210ENST00000493682 ZNF767PQ75MW2 155 aa12.52□□□□□ -0.41
COL9A1-210ENST00000493682 RNASE11Q8TAA1 199 aaKnown RBP12.52□□□□□ -0.41
COL9A1-210ENST00000493682 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
COL9A1-210ENST00000493682 COPZ2Q9P299 210 aa12.52□□□□□ -0.41
COL9A1-210ENST00000493682 DEFB131BA0A096LNP1 70 aa12.51□□□□□ -0.41
COL9A1-210ENST00000493682 RPS10-NUDT3A0A1W2PQS6 291 aa12.51□□□□□ -0.41
COL9A1-210ENST00000493682 AMBPP02760 352 aa12.51□□□□□ -0.41
COL9A1-210ENST00000493682 IGLC1P0CG04 106 aa12.51□□□□□ -0.41
COL9A1-210ENST00000493682 HTR2BP41595 481 aa12.51□□□□□ -0.41
COL9A1-210ENST00000493682 SPCS3P61009 180 aa12.51□□□□□ -0.41
COL9A1-210ENST00000493682 VBP1P61758 197 aa12.51□□□□□ -0.41
COL9A1-210ENST00000493682 AARDQ4LEZ3 155 aa12.51□□□□□ -0.41
COL9A1-210ENST00000493682 C4orf48Q5BLP8 95 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms