RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 MFFQ9GZY8 342 aa7.53□□□□□ -1.2
NUDCD3-210ENST00000493613 KLK11Q9UBX7 282 aa7.53□□□□□ -1.2
NUDCD3-210ENST00000493613 FBXL17Q9UF56 701 aa7.53□□□□□ -1.2
NUDCD3-210ENST00000493613 A0A0B4J293 547 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 DNASE2O00115 360 aaPredicted RBP7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 IFNA17P01571 189 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 IGKV1-5P01602 117 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 APOHP02749 345 aaPredicted RBP7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 IFNA4P05014 189 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 NPBWR1P48145 328 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 AKR1C2P52895 323 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 PIGPP57054 158 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 PYDC2Q56P42 97 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 RNASE10Q5GAN6 216 aaKnown RBP7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 LILRB2Q8N423 598 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 SLC35G3Q8N808 338 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 MS4A6AQ9H2W1 248 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 VSIRQ9H7M9 311 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 ZFAND3Q9H8U3 227 aa7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 PUS1Q9Y606 427 aaKnown RBP eCLIP7.52□□□□□ -1.21
NUDCD3-210ENST00000493613 HECTD4Q9Y4D8 3996 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 DEFB4AO15263 64 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 DFFBO76075 338 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 CD3DP04234 171 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 ETV6P41212 452 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 DEFB131AP59861 70 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 RND3P61587 244 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 MRPS10P82664 201 aaKnown RBP7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 TMEM187Q14656 261 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 TRIM16LQ309B1 348 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 SP6Q3SY56 376 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 TRIQKQ629K1 86 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 LEMD1Q68G75 181 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 ZNF600Q6ZNG1 722 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 ZNF486Q96H40 463 aaPredicted RBP7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 TP53RKQ96S44 253 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 PDCD10Q9BUL8 212 aa7.51□□□□□ -1.21
NUDCD3-210ENST00000493613 TRAV2A0A0B4J234 112 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 C3orf85A0A1B0GTC6 90 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 A0A1B0GU03 582 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 ATG12O94817 140 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 TMEM50AO95807 157 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 HOXA1P49639 335 aaPredicted RBP7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 PPP5CP53041 499 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 SUB1P53999 127 aaKnown RBP eCLIP7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 DEFA1P59665 94 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 DEFA3P59666 94 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 CCDC190Q86UF4 302 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 LHFPL1Q86WI0 220 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 STHQ8IWL8 128 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 ARRDC1Q8N5I2 433 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 OR52I2Q8NH67 350 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 RNASE11Q8TAA1 199 aaKnown RBP7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 C2CD4CQ8TF44 421 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 RRNAD1Q96FB5 475 aaKnown RBP7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 CCDC32Q9BV29 185 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 MIXL1Q9H2W2 232 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 TMEM231Q9H6L2 316 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 ENY2Q9NPA8 101 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 COPZ2Q9P299 210 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 RABAC1Q9UI14 185 aa7.5□□□□□ -1.21
NUDCD3-210ENST00000493613 DNAH10Q8IVF4 4471 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 INS-IGF2F8WCM5 200 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 CORTO00230 105 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 P0C879 139 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 RNASE2P10153 161 aaKnown RBP7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 NPPCP23582 126 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 OPRK1P41145 380 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 TCTAP57738 103 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 MLANAQ16655 118 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 SCGB2B2Q4G0G5 96 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 FAM24BQ8N5W8 94 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 OR4D10Q8NGI6 311 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 TERB2Q8NHR7 220 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 ABHD1Q96SE0 405 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 MRPL36Q9P0J6 103 aaKnown RBP7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 MTFP1Q9UDX5 166 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 VPS13DQ5THJ4 4388 aa7.49□□□□□ -1.21
NUDCD3-210ENST00000493613 A0A0G2JRQ6 117 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 A0A1W2PS18 150 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 CLN5O75503 358 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 TBPP20226 339 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 AP3S2P59780 193 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 PRR20EP86478 221 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 PRR20CP86479 221 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 PRR20DP86480 221 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 PRR20BP86481 221 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 PRR20AP86496 221 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 PVRIGQ6DKI7 326 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 CCDC71LQ8N9Z2 235 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 Q8NAQ8 132 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 STXBP6Q8NFX7 210 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 OR13C8Q8NGS7 320 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 ZFAND1Q8TCF1 268 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 MARCH1Q8TCQ1 289 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 TMEM230Q96A57 120 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 METTL26Q96S19 204 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 KRTAP17-1Q9BYP8 105 aa7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 FNDC4Q9H6D8 234 aaPredicted RBP7.48□□□□□ -1.21
NUDCD3-210ENST00000493613 CENPXA8MT69 81 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms