RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 CEBPZOSA8MTT3 80 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 SFT2D2O95562 160 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 VAMP1P23763 118 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 OPRK1P41145 380 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 ANKRD55Q3KP44 614 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 NOXA1Q86UR1 476 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 OR10C1Q96KK4 312 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 C20orf24Q9BUV8 137 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 HIPK2Q9H2X6 1198 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 TUBA4BQ9H853 241 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
PKP4-214ENST00000492496 RPS10-NUDT3A0A1W2PQS6 291 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 CENPXA8MT69 81 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 NDUFB6O95139 128 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 TMEM50AO95807 157 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 CD7P09564 240 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 SLC25A6P12236 298 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 TNFRSF9Q07011 255 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 RBPMS2Q6ZRY4 209 aaKnown RBP11.98□□□□□ -0.49
PKP4-214ENST00000492496 SLC16A13Q7RTY0 426 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 SLC24A4Q8NFF2 622 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 OR4X1Q8NH49 305 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 RNASEH2CQ8TDP1 164 aaKnown RBP11.98□□□□□ -0.49
PKP4-214ENST00000492496 WWC2-AS2Q96NR7 200 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 FNDC4Q9H6D8 234 aaPredicted RBP11.98□□□□□ -0.49
PKP4-214ENST00000492496 ZMAT4Q9H898 229 aa11.98□□□□□ -0.49
PKP4-214ENST00000492496 CLN5O75503 358 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 YIF1AO95070 293 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 SCAF4O95104 1147 aaKnown RBP11.97□□□□□ -0.49
PKP4-214ENST00000492496 IL7P13232 177 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 PPP1R1AQ13522 171 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 LAMTOR1Q6IAA8 161 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 ZNF600Q6ZNG1 722 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 TM2D3Q9BRN9 247 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 SMPXQ9UHP9 88 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 SELENOKQ9Y6D0 94 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 COL7A1Q02388 2944 aa11.97□□□□□ -0.49
PKP4-214ENST00000492496 IGHV3OR16-8A0A075B7F1 116 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 TRAV30A0A087WSZ9 112 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 IGHV7-4-1A0A0J9YVY3 117 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 OR11H12B2RN74 326 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 TSPAN4O14817 238 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 ZNF207O43670 478 aaKnown RBP11.96□□□□□ -0.49
PKP4-214ENST00000492496 PITX3O75364 302 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 NXPH3O95157 252 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 NPY1RP25929 384 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 CNPY1Q3B7I2 92 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 LINC00299Q6ZSB3 139 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 OR52B4Q8NGK2 314 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 OR1S1Q8NH92 325 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 DTD1Q8TEA8 209 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 SPAG8Q99932 426 aaPredicted RBP11.96□□□□□ -0.49
PKP4-214ENST00000492496 GINS3Q9BRX5 216 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 TMED3Q9Y3Q3 217 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 U3KQ87 197 aa11.96□□□□□ -0.49
PKP4-214ENST00000492496 TRAV14DV4A0A0A6YYC5 116 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 SLC25A4P12235 298 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 ATP5IP56385 69 aaPredicted RBP11.95□□□□□ -0.5
PKP4-214ENST00000492496 MLANAQ16655 118 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 ETFRF1Q6IPR1 90 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 TOMM20LQ6UXN7 152 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 RCHY1Q96PM5 261 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 RBKSQ9H477 322 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 MRPL36Q9P0J6 103 aaKnown RBP11.95□□□□□ -0.5
PKP4-214ENST00000492496 DNAH9Q9NYC9 4486 aa11.95□□□□□ -0.5
PKP4-214ENST00000492496 LINC00854A0A1B0GVQ3 168 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 C9orf170A2RU37 121 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 FAM90A26D6RGX4 464 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 CHEK1O14757 476 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 IFNA10P01566 189 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 BTCP35070 178 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 BMI1P35226 326 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 HAGHQ16775 308 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 LINC00322Q6ZN03 302 aaPredicted RBP11.94□□□□□ -0.5
PKP4-214ENST00000492496 DEFB125Q8N687 156 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 TMEM170AQ8WVE7 144 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 RHPN1-AS1Q9BWJ2 59 aa11.94□□□□□ -0.5
PKP4-214ENST00000492496 PUS1Q9Y606 427 aaKnown RBP eCLIP11.94□□□□□ -0.5
PKP4-214ENST00000492496 CD5P06127 495 aa11.93□□□□□ -0.5
PKP4-214ENST00000492496 OR1S2Q8NGQ3 325 aa11.93□□□□□ -0.5
PKP4-214ENST00000492496 WFDC10AQ9H1F0 79 aa11.93□□□□□ -0.5
PKP4-214ENST00000492496 SRD5A3Q9H8P0 318 aa11.93□□□□□ -0.5
PKP4-214ENST00000492496 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
PKP4-214ENST00000492496 OR4C46A6NHA9 309 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 A6NHS1 94 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 PLA2G10O15496 165 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 MED6O75586 246 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 IGKV1-17P01599 117 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 OR4E1P0C645 316 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 LINC01559Q495D7 138 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 GGNBP1Q5YKI7 109 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 PRSS54Q6PEW0 395 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 LYG2Q86SG7 212 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 RNF2Q99496 336 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 SPATA25Q9BR10 227 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 CCDC32Q9BV29 185 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 FLVCR2Q9UPI3 526 aa11.92□□□□□ -0.5
PKP4-214ENST00000492496 RBMY1BA6NDE4 496 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms