RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MRPS10P82664 201 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 ATP5G2Q06055 141 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 FCN2Q15485 313 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 KLK9Q2XQG4 91 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 RBPMS2Q6ZRY4 209 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 MMD2Q8IY49 270 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 OR4C5Q8NGB2 326 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 SRSF12Q8WXF0 261 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 MGLLQ99685 303 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 GINS4Q9BRT9 223 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 HRH4Q9H3N8 390 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 SLC2A8Q9NY64 477 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 TECRQ9NZ01 308 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 KLK9Q9UKQ9 250 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 HSPB11Q9Y547 144 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 RBM7Q9Y580 266 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 STARD9Q9P2P6 4700 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 TMEM272A0A1B0GTI8 110 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 C20orf202A1L168 122 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 IFITM5A6NNB3 132 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 LGALS9O00182 355 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 RAB27BO00194 218 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 MFNGO00587 321 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 JTBO76095 146 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 ACTL6BO94805 426 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 CD5P06127 495 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 ANXA3P12429 323 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 SNRPBP14678 240 aaKnown RBP6.92□□□□□ -1.3
HDAC3-212ENST00000492407 HIST1H1DP16402 221 aaKnown RBP6.92□□□□□ -1.3
HDAC3-212ENST00000492407 CRYBA4P53673 196 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 RPS25P62851 125 aaKnown RBP6.92□□□□□ -1.3
HDAC3-212ENST00000492407 RHOGP84095 191 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 FABP5Q01469 135 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 ZFAND6Q6FIF0 208 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 HAPLN4Q86UW8 402 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 H1FOOQ8IZA3 346 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-212ENST00000492407 VSTM2AQ8TAG5 236 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 ASB13Q8WXK3 278 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 ZNF230Q9UIE0 474 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-212ENST00000492407 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
HDAC3-212ENST00000492407 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 TEX46H3BTG2 121 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 K7ERU9 68 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 BMPR1BO00238 502 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 MPPED1O15442 326 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 TGOLN2O43493 480 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 SCGNO76038 276 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 ATG12O94817 140 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 HLA-DQB1P01920 261 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 OR10J4P0C629 311 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 S100A2P29034 98 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 KIR2DS2P43631 304 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 CLDN12P56749 244 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 TNXAQ16473 311 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 DEFB114Q30KQ6 69 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 UQCC3Q6UW78 93 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 GPHB5Q86YW7 130 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 BAP18Q8IXM2 172 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 ZNF645Q8N7E2 425 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 OR4S2Q8NH73 311 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 FUNDC2Q9BWH2 189 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 OR51E2Q9H255 320 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 ZNF257Q9Y2Q1 563 aa6.91□□□□□ -1.3
HDAC3-212ENST00000492407 TRDV1A0A1B0GX56 115 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 TMEM218A2RU14 115 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 FAM74A7A6NL05 159 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 LINC00473A8K010 186 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 NPIPB5A8MRT5 1133 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 TSPAN13O95857 204 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 TRBV12-3P01733 135 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 GNB3P16520 340 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 CRHBPP24387 322 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 FABP9Q0Z7S8 132 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 RAB32Q13637 225 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 ARFRP1Q13795 201 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 EXOSC2Q13868 293 aaKnown RBP6.9□□□□□ -1.3
HDAC3-212ENST00000492407 MSMO1Q15800 293 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 CD300EQ496F6 205 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-212ENST00000492407 FAM74A3Q4VXF1 159 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 ZNF367Q7RTV3 350 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 S100A7AQ86SG5 101 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 ZNF546Q86UE3 836 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 SVBPQ8N300 66 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 C15orf54Q8N8G6 183 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 SMIM8Q96KF7 97 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 HSD17B10Q99714 261 aaKnown RBP6.9□□□□□ -1.3
HDAC3-212ENST00000492407 OR2W1Q9Y3N9 320 aa6.9□□□□□ -1.3
HDAC3-212ENST00000492407 IZUMO1RA6ND01 250 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 HPGDSO60760 199 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 SAA1P0DJI8 122 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-212ENST00000492407 MYL9P24844 172 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 PTTG1IPP53801 180 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 PLA2G7Q13093 441 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 C15orf32Q32M92 178 aa6.89□□□□□ -1.31
HDAC3-212ENST00000492407 ANKRD55Q3KP44 614 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms