RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	MRPL20	Q9BYC9	149 aa	Known RBP	5.14	□□□□□ -1.59
FN1-223	ENST00000490833	DPM3	Q9P2X0	92 aa		5.14	□□□□□ -1.59
FN1-223	ENST00000490833	RFNG	Q9Y644	331 aa		5.14	□□□□□ -1.59
FN1-223	ENST00000490833	MINOS1-NBL1	R4GNA1	71 aa		5.14	□□□□□ -1.59
FN1-223	ENST00000490833	IGHV2-26	A0A0B4J1V2	119 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	TRAV3	A0A0B4J244	114 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.13	□□□□□ -1.59
FN1-223	ENST00000490833	ENSA	O43768	121 aa	Known RBP	5.13	□□□□□ -1.59
FN1-223	ENST00000490833	HLA-DQA1	P01909	254 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	CRYGC	P07315	174 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	IGFBP2	P18065	325 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	PKIA	P61925	76 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	SPINK9	Q5DT21	86 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	TEX38	Q6PEX7	206 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	SSX7	Q7RTT5	188 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	TCF23	Q7RTU1	214 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	ATP5L2	Q7Z4Y8	100 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	LY6G5B	Q8NDX9	201 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	OR4X1	Q8NH49	305 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	SSMEM1	Q8WWF3	244 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	FRZB	Q92765	325 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	EAF1	Q96JC9	268 aa	Predicted RBP	5.13	□□□□□ -1.59
FN1-223	ENST00000490833	TXN2	Q99757	166 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	PAXX	Q9BUH6	204 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	SEPSECS	Q9HD40	501 aa	Known RBP	5.13	□□□□□ -1.59
FN1-223	ENST00000490833	TMEM14C	Q9P0S9	112 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	SIGLEC9	Q9Y336	463 aa		5.13	□□□□□ -1.59
FN1-223	ENST00000490833	WDFY4	Q6ZS81	3184 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	IGHV1-3	A0A0C4DH29	117 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833		A0A1B0GW15	77 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	PCP4L1	A6NKN8	68 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	SRRM4	A7MD48	611 aa	Known RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	DEFA4	P12838	97 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	PRTN3	P24158	256 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	TPPP2	P59282	170 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	UBE2G2	P60604	165 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	UBE2G1	P62253	170 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	UBE2L3	P68036	154 aa	Known RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	CX3CL1	P78423	397 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833		Q0VG73	95 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	JOSD1	Q15040	202 aa	Predicted RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	PLGLA	Q15195	96 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	CT83	Q5H943	113 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	OR10J3	Q5JRS4	329 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	FAM201A	Q5SY85	155 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	ZNF343	Q6P1L6	599 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	OCC1	Q8TAD7	63 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	LEAP2	Q969E1	77 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	FMC1	Q96HJ9	113 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	ZNF48	Q96MX3	618 aa	Predicted RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	ATP6V0B	Q99437	205 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	GFRA4	Q9GZZ7	299 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	ZNF331	Q9NQX6	463 aa	Predicted RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	TNFRSF19	Q9NS68	423 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	TBL2	Q9Y4P3	447 aa	Known RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	F11R	Q9Y624	299 aa	Known RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	CHD3	Q12873	2000 aa	Known RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	DYSF	O75923	2080 aa		5.12	□□□□□ -1.59
FN1-223	ENST00000490833	EP300	Q09472	2414 aa	Predicted RBP	5.12	□□□□□ -1.59
FN1-223	ENST00000490833	URB1	O60287	2271 aa	Known RBP	5.11	□□□□□ -1.59
FN1-223	ENST00000490833	LOC105371242	A0A075B767	164 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	TRBV6-1	A0A0K0K1D8	114 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833		A0A1W2PPE3	182 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	TMEM8B	A6NDV4	472 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833		A8MWL6	223 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833		K7EM74	188 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	SLC25A17	O43808	307 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	CNIH1	O95406	144 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	MOS	P00540	346 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	IGLV2-23	P01705	113 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	REG1A	P05451	166 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	CRYGB	P07316	175 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	FAM106CP	P0CH98	169 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	ESD	P10768	282 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	SELL	P14151	372 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	FABP4	P15090	132 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	CCL3L1	P16619	93 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	BRS3	P32247	399 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	ATP5G3	P48201	142 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	LGALS4	P56470	323 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	LINC00205	P59089	165 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	SUMO1	P63165	101 aa	Known RBP	5.11	□□□□□ -1.59
FN1-223	ENST00000490833	CTAG1A	P78358	180 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	DEFA6	Q01524	100 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	PDE6H	Q13956	83 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	TMEM183B	Q1AE95	376 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	IBA57	Q5T440	356 aa	Known RBP	5.11	□□□□□ -1.59
FN1-223	ENST00000490833		Q6AWC8	147 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	TOMM20L	Q6UXN7	152 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	MOB3B	Q86TA1	216 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	MRPL52	Q86TS9	123 aa	Known RBP	5.11	□□□□□ -1.59
FN1-223	ENST00000490833	DTX2	Q86UW9	622 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	BPIFA4P	Q86YQ2	179 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	C5orf17	Q8NAS9	161 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	NPB	Q8NG41	125 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	OR5AU1	Q8NGC0	362 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	OR10D4P	Q8NGN7	298 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	WIPF2	Q8TF74	440 aa	Predicted RBP	5.11	□□□□□ -1.59
FN1-223	ENST00000490833	IGFBPL1	Q8WX77	278 aa		5.11	□□□□□ -1.59
FN1-223	ENST00000490833	NPIPB3	Q92617	1050 aa		5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms