RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ZADH2Q8N4Q0 377 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 COQ2Q96H96 371 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 RASL11BQ9BPW5 248 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 MED12LQ86YW9 2145 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 SAA2-SAA4A0A096LPE2 208 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 GFRA3O60609 400 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 SAA2P0DJI9 122 aaPredicted RBP10.62□□□□□ -0.71
SHOX2-205ENST00000490689 FAM216BQ8N7L0 139 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 PEF1Q9UBV8 284 aaKnown RBP10.62□□□□□ -0.71
SHOX2-205ENST00000490689 A0A087X0K7 114 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 FAM181BA6NEQ2 426 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 H3BUT2 72 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 APOHP02749 345 aaPredicted RBP10.62□□□□□ -0.71
SHOX2-205ENST00000490689 LIPFP07098 398 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 PSG1P11464 419 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 IGHV1-2P23083 117 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 CRIP3Q6Q6R5 217 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 YPEL4Q96NS1 127 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 GUCD1Q96NT3 240 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 FGF23Q9GZV9 251 aaPredicted RBP10.62□□□□□ -0.71
SHOX2-205ENST00000490689 RPL11P62913 178 aaKnown RBP10.62□□□□□ -0.71
SHOX2-205ENST00000490689 TPTE2P1Q5T6R2 138 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 NUDT10Q8NFP7 164 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 RPEQ96AT9 228 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 NUDT11Q96G61 164 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 SFXN3Q9BWM7 321 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHOX2-205ENST00000490689 TRAV17A0A0B4J275 112 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 ACP1P24666 158 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 RPL15P61313 204 aaKnown RBP10.61□□□□□ -0.71
SHOX2-205ENST00000490689 Q0VFX4 171 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 ODF3L1Q8IXM7 274 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 THYN1Q9P016 225 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 SLC25A10Q9UBX3 287 aaPredicted RBP10.61□□□□□ -0.71
SHOX2-205ENST00000490689 C15orf61A6NNL5 157 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 IL18BPO95998 194 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 CLEC3BP05452 202 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 SELENOTP62341 195 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 C10orf55Q5SWW7 151 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 SNRNP40Q96DI7 357 aaKnown RBP10.61□□□□□ -0.71
SHOX2-205ENST00000490689 NDFIP1Q9BT67 221 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 PILRBQ9UKJ0 227 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 UFC1Q9Y3C8 167 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 KIR2DL5BA0A0G2JN68 375 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 KIR2DL5BA0A0G2JPC4 375 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 ZNF207O43670 478 aaKnown RBP10.61□□□□□ -0.71
SHOX2-205ENST00000490689 KIR2DL5AQ8N109 375 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 MEGF9Q9H1U4 602 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 HIGD1AQ9Y241 93 aa10.61□□□□□ -0.71
SHOX2-205ENST00000490689 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 TRBV6-6A0A0A6YYG2 114 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 NCBP2LA6PVI3 153 aaKnown RBP10.6□□□□□ -0.71
SHOX2-205ENST00000490689 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
SHOX2-205ENST00000490689 COLCA1Q6ZS62 124 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 S4R3C0 116 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 ZNF785A8K8V0 405 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 J3KRW8 73 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 YPEL3P61236 119 aaPredicted RBP10.6□□□□□ -0.71
SHOX2-205ENST00000490689 OR10AG1Q8NH19 301 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 COX11Q9Y6N1 276 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 FABP2P12104 132 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 CKS2P33552 79 aa10.6□□□□□ -0.71
SHOX2-205ENST00000490689 TMEM97Q5BJF2 176 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 KIR3DL3Q8N743 410 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 RAB1CQ92928 201 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 IDI2-AS1Q9NZ38 188 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 INSIG2Q9Y5U4 225 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 TRBV20OR9-2A0A075B6H5 130 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 IGHV3-35A0A0C4DH35 117 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 A0A1W2PRE2 83 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 C9JCJ5 164 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 GPR183P32249 361 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 RPL27AP46776 148 aaKnown RBP10.59□□□□□ -0.71
SHOX2-205ENST00000490689 FXYD7P58549 80 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 TEX43Q6ZNM6 134 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 TMEM136Q6ZRR5 245 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 WDR31Q8NA23 367 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 C7orf71A4D174 169 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 IQCF6A8MYZ5 107 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 M0R296 226 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 TWIST1Q15672 202 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 GCSAMQ8N6F7 178 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 NUP35Q8NFH5 326 aa10.59□□□□□ -0.71
SHOX2-205ENST00000490689 RPP21Q9H633 154 aaKnown RBP10.59□□□□□ -0.71
SHOX2-205ENST00000490689 RANBP2P49792 3224 aaKnown RBP10.59□□□□□ -0.71
SHOX2-205ENST00000490689 SAA1P0DJI8 122 aaPredicted RBP10.58□□□□□ -0.71
SHOX2-205ENST00000490689 AREGP15514 252 aa10.58□□□□□ -0.71
SHOX2-205ENST00000490689 Q0VG73 95 aa10.58□□□□□ -0.71
SHOX2-205ENST00000490689 SLAQ13239 276 aa10.58□□□□□ -0.71
SHOX2-205ENST00000490689 NKX2-8O15522 239 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 GNG7O60262 68 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 ZCCHC24Q8N2G6 241 aaKnown RBP10.58□□□□□ -0.72
SHOX2-205ENST00000490689 OR52E5Q8NH55 327 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 ORAOV1Q8WV07 137 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 C19orf24Q9BVV8 132 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 MRPL32Q9BYC8 188 aaKnown RBP10.58□□□□□ -0.72
SHOX2-205ENST00000490689 LSM4Q9Y4Z0 139 aaKnown RBP10.58□□□□□ -0.72
SHOX2-205ENST00000490689 BDP1A6H8Y1 2624 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 ADAMTS9Q9P2N4 1935 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms