RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 PAX1P15863 534 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 NDUFB7P17568 137 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 BMP5P22003 454 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 USF1P22415 310 aaPredicted RBP4.11□□□□□ -1.75
PTPRK-213ENST00000490332 CHRNA7P36544 502 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 GALR1P47211 349 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 LGALS7P47929 136 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 TAS2R45P59539 299 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 RPL23P62829 140 aaKnown RBP4.11□□□□□ -1.75
PTPRK-213ENST00000490332 PRCDQ00LT1 54 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 FAM27E3Q08E93 113 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 FOXL1Q12952 345 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 COX19Q49B96 90 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 TMEM177Q53S58 311 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 C2orf83Q53S99 150 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 RPL39P5Q59GN2 51 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 LRRC10Q5BKY1 277 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 SSX9Q7RTT3 188 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 TMEM144Q7Z5S9 345 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.11□□□□□ -1.75
PTPRK-213ENST00000490332 SYT8Q8NBV8 401 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 ZNF439Q8NDP4 499 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 OR1L8Q8NGR8 309 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 OR2T10Q8NGZ9 312 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 ZNF596Q8TC21 504 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 TMEM190Q8WZ59 177 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 TNFRSF14Q92956 283 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 ACY3Q96HD9 319 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 CCL13Q99616 98 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 PCGF1Q9BSM1 259 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 PARLQ9H300 379 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 SLC25A22Q9H936 323 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 NIT2Q9NQR4 276 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 SLC35D1Q9NTN3 355 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 TECRQ9NZ01 308 aaKnown RBP4.11□□□□□ -1.75
PTPRK-213ENST00000490332 JKAMPQ9P055 326 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 KAAG1Q9UBP8 84 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 LSM4Q9Y4Z0 139 aaKnown RBP4.11□□□□□ -1.75
PTPRK-213ENST00000490332 PXMP4Q9Y6I8 212 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 SAA2-SAA4A0A096LPE2 208 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 TRBV23-1A0A0A0MS06 115 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 A0A0G2JNJ9 132 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 TEX50A0A1B0GTY4 177 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 A0A1W2PPE3 182 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 DPRXA6NFQ7 191 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 B9A039 149 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 PRSS46E5RG02 174 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 TMEM178BH3BS89 294 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 RRHO14718 337 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BKO60814 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 GGCTO75223 188 aaKnown RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 YIF1AO95070 293 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 TRGC2P03986 189 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BJP06899 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 FABP1P07148 127 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 OR4A8P0C604 315 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 TRGC1P0CF51 173 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 SAA2P0DJI9 122 aaPredicted RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 CT45A6P0DMU7 189 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 CT45A5P0DMU8 189 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 CT45A7P0DMV0 189 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HNF1AP20823 631 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BOP23527 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 APOBEC3AP31941 199 aaPredicted RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BBP33778 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 PRRX1P54821 245 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BDP58876 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 ERVFRD-1P60508 538 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 B2MP61769 119 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 SELENOTP62341 195 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BCP62807 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 RPL31P62899 125 aaKnown RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST2H2BEQ16778 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 COA6Q5JTJ3 125 aaKnown RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 CST9LP1Q5W188 147 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 ETFRF1Q6IPR1 90 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 FAM53AQ6NSI3 398 aaPredicted RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 PQLC2Q6ZP29 291 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 SSX7Q7RTT5 188 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 C16orf82Q7Z2V1 217 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 PDPNQ86YL7 162 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 ABHD12Q8N2K0 398 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 ZNF383Q8NA42 475 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 DEFB108BQ8NET1 73 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 OR5AN1Q8NGI8 311 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 OR51G1Q8NGK1 321 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 RNASEH2CQ8TDP1 164 aaKnown RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 NEUROG1Q92886 237 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BHQ93079 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 FLYWCH2Q96CP2 140 aaKnown RBP4.1□□□□□ -1.75
PTPRK-213ENST00000490332 ZNF714Q96N38 554 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BNQ99877 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 HIST1H2BMQ99879 126 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 COMMD5Q9GZQ3 224 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 Q9UFV3 132 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 URGCP-MRPS24S4R325 110 aa4.1□□□□□ -1.75
PTPRK-213ENST00000490332 PRR14LQ5THK1 2151 aa4.09□□□□□ -1.75
PTPRK-213ENST00000490332 A0A087X0M5 115 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms