RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
MDC1-206ENST00000489540 B9D2Q9BPU9 175 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 WDR12Q9GZL7 423 aaKnown RBP13.13□□□□□ -0.31
MDC1-206ENST00000489540 K7EMT4 169 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 NXPH3O95157 252 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 ANXA7P20073 488 aaKnown RBP13.13□□□□□ -0.31
MDC1-206ENST00000489540 OPRK1P41145 380 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
MDC1-206ENST00000489540 DHRS2Q13268 280 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 ZNF846Q147U1 533 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 LYG2Q86SG7 212 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 DTD1Q8TEA8 209 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 RBKSQ9H477 322 aa13.13□□□□□ -0.31
MDC1-206ENST00000489540 DAZ1Q9NQZ3 744 aaKnown RBP13.13□□□□□ -0.31
MDC1-206ENST00000489540 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 FAM90A26D6RGX4 464 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 HOXB5P09067 269 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 EDN2P20800 178 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 NPY1RP25929 384 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 CD69Q07108 199 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 GGNBP1Q5YKI7 109 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 GTSCR1Q86UQ5 136 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 OR4X1Q8NH49 305 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 C20orf24Q9BUV8 137 aa13.12□□□□□ -0.31
MDC1-206ENST00000489540 FNDC4Q9H6D8 234 aaPredicted RBP13.12□□□□□ -0.31
MDC1-206ENST00000489540 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 SCGB2A1O75556 95 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 MED6O75586 246 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 TMEM50AO95807 157 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 IFNA10P01566 189 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 TCRBP04435 133 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 ETFRF1Q6IPR1 90 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 Q8N1Y9 231 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 CACNG8Q8WXS5 425 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 C20orf85Q9H1P6 137 aa13.11□□□□□ -0.31
MDC1-206ENST00000489540 ZNF785A8K8V0 405 aa13.1□□□□□ -0.31
MDC1-206ENST00000489540 CLN5O75503 358 aa13.1□□□□□ -0.31
MDC1-206ENST00000489540 YIF1AO95070 293 aa13.1□□□□□ -0.31
MDC1-206ENST00000489540 IFNA21P01568 189 aa13.1□□□□□ -0.31
MDC1-206ENST00000489540 SLC25A4P12235 298 aa13.1□□□□□ -0.31
MDC1-206ENST00000489540 MLANAQ16655 118 aa13.1□□□□□ -0.31
MDC1-206ENST00000489540 MZT2BQ6NZ67 158 aa13.1□□□□□ -0.31
MDC1-206ENST00000489540 MLXQ9UH92 298 aa13.1□□□□□ -0.31
MDC1-206ENST00000489540 TRAV30A0A087WSZ9 112 aa13.09□□□□□ -0.31
MDC1-206ENST00000489540 TRAV25A0A0B4J276 109 aa13.09□□□□□ -0.31
MDC1-206ENST00000489540 NHLRC4P0CG21 123 aaPredicted RBP13.09□□□□□ -0.31
MDC1-206ENST00000489540 TMEM170AQ8WVE7 144 aa13.09□□□□□ -0.31
MDC1-206ENST00000489540 OR10C1Q96KK4 312 aa13.09□□□□□ -0.31
MDC1-206ENST00000489540 FAM240BA0A1B0GVZ2 78 aa13.08□□□□□ -0.32
MDC1-206ENST00000489540 ADAP1O75689 374 aa13.08□□□□□ -0.32
MDC1-206ENST00000489540 UPK1BO75841 260 aa13.08□□□□□ -0.32
MDC1-206ENST00000489540 ASAH1Q13510 395 aa13.08□□□□□ -0.32
MDC1-206ENST00000489540 GUCA2BQ16661 112 aa13.08□□□□□ -0.32
MDC1-206ENST00000489540 BTNL8Q6UX41 500 aa13.08□□□□□ -0.32
MDC1-206ENST00000489540 ZNF600Q6ZNG1 722 aa13.08□□□□□ -0.32
MDC1-206ENST00000489540 MITD1Q8WV92 249 aa13.08□□□□□ -0.32
MDC1-206ENST00000489540 CIB3Q96Q77 187 aaPredicted RBP13.08□□□□□ -0.32
MDC1-206ENST00000489540 IFNA4P05014 189 aa13.07□□□□□ -0.32
MDC1-206ENST00000489540 RPP30P78346 268 aaKnown RBP13.07□□□□□ -0.32
MDC1-206ENST00000489540 PRSS54Q6PEW0 395 aa13.07□□□□□ -0.32
MDC1-206ENST00000489540 RBPMS2Q6ZRY4 209 aaKnown RBP13.07□□□□□ -0.32
MDC1-206ENST00000489540 TMEM61Q8N0U2 210 aa13.07□□□□□ -0.32
MDC1-206ENST00000489540 TMEM116Q8NCL8 245 aa13.07□□□□□ -0.32
MDC1-206ENST00000489540 WDR89Q96FK6 387 aaPredicted RBP13.07□□□□□ -0.32
MDC1-206ENST00000489540 ZNF414Q96IQ9 312 aa13.07□□□□□ -0.32
MDC1-206ENST00000489540 GINS3Q9BRX5 216 aa13.07□□□□□ -0.32
MDC1-206ENST00000489540 NUDT15Q9NV35 164 aa13.07□□□□□ -0.32
MDC1-206ENST00000489540 MRPL36Q9P0J6 103 aaKnown RBP13.07□□□□□ -0.32
MDC1-206ENST00000489540 TBC1D24Q9ULP9 559 aa13.07□□□□□ -0.32
MDC1-206ENST00000489540 IGHV3OR16-8A0A075B7F1 116 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 TRAV14DV4A0A0A6YYC5 116 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 A8MZ25 164 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 SYNGR2O43760 224 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 H2AFB2P0C5Z0 115 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 RAB11AP62491 216 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 LAMTOR1Q6IAA8 161 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 C11orf87Q6NUJ2 197 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 TOMM20LQ6UXN7 152 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 SMPXQ9UHP9 88 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 TGP01266 2768 aa13.06□□□□□ -0.32
MDC1-206ENST00000489540 TRAV6A0A075B6T7 132 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 IGHV7-4-1A0A0J9YVY3 117 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 ZNF207O43670 478 aaKnown RBP13.05□□□□□ -0.32
MDC1-206ENST00000489540 IGHV4-30-4P0DP06 118 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 GPX4P36969 197 aaPredicted RBP13.05□□□□□ -0.32
MDC1-206ENST00000489540 CD81P60033 236 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 ID3Q02535 119 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 OR1S2Q8NGQ3 325 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 NEURL2Q9BR09 285 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 PUS1Q9Y606 427 aaKnown RBP eCLIP13.05□□□□□ -0.32
MDC1-206ENST00000489540 SCAF4O95104 1147 aaKnown RBP13.05□□□□□ -0.32
MDC1-206ENST00000489540 IGKV1-17P01599 117 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 FRMD6-AS1P0C7T7 363 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 IAPPP10997 89 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 BMI1P35226 326 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 RND2P52198 227 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 SLC16A13Q7RTY0 426 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 RHPN1-AS1Q9BWJ2 59 aa13.05□□□□□ -0.32
MDC1-206ENST00000489540 MAGT1Q9H0U3 335 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms