RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CBLN1P23435 193 aa9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 NPY1RP25929 384 aa9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 HTR2BP41595 481 aa9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 SUB1P53999 127 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 SPSB3Q6PJ21 355 aa9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 UXS1Q8NBZ7 420 aa9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 WDR89Q96FK6 387 aaPredicted RBP9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 SEC22CQ9BRL7 303 aa9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 MAGT1Q9H0U3 335 aa9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 SIGLEC8Q9NYZ4 499 aa9.27□□□□□ -0.93
SMARCD3-213ENST00000489503 IGHV3-49A0A0A0MS15 119 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 NDUFA4O00483 81 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 CCSO14618 274 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 NUPL2O15504 423 aaKnown RBP9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 UPK1BO75841 260 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 IFNA10P01566 189 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 FCGR2BP31994 310 aaPredicted RBP9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 DEFB114Q30KQ6 69 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 C2orf83Q53S99 150 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 LCN12Q6JVE5 192 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 TMEM61Q8N0U2 210 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 DUSP18Q8NEJ0 188 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 COQ8AQ8NI60 647 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 HIPK2Q9H2X6 1198 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 UFC1Q9Y3C8 167 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 TMED3Q9Y3Q3 217 aa9.26□□□□□ -0.93
SMARCD3-213ENST00000489503 FAM240BA0A1B0GVZ2 78 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 CORTO00230 105 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 YIF1AO95070 293 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 SCAF4O95104 1147 aaKnown RBP9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 RND2P52198 227 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 CD69Q07108 199 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 ASAH1Q13510 395 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 GUCA2BQ16661 112 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 ATP6V0BQ99437 205 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 TXN2Q99757 166 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 ASCL2Q99929 193 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 WFDC10AQ9H1F0 79 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 PALMDQ9NP74 551 aa9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 PAIP2BQ9ULR5 123 aaKnown RBP9.25□□□□□ -0.93
SMARCD3-213ENST00000489503 IGHV3OR16-13A0A075B7E8 117 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 IGHV3-74A0A0B4J1X5 117 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 H3BP45 60 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 TMEM50AO95807 157 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 SLC25A6P12236 298 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 NPBWR1P48145 328 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 RELQ04864 619 aaPredicted RBP9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 TIGITQ495A1 244 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 PRSS54Q6PEW0 395 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 SLC16A13Q7RTY0 426 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 Q8N1Y9 231 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 ACY3Q96HD9 319 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 B9D2Q9BPU9 175 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 DAZ1Q9NQZ3 744 aaKnown RBP9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 GAR1Q9NY12 217 aaKnown RBP9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 SMAD5-AS1Q9Y6J3 95 aa9.24□□□□□ -0.93
SMARCD3-213ENST00000489503 PIGBOS1A0A0B4J2F0 54 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 RPS10-NUDT3A0A1W2PQS6 291 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 C15orf62A8K5M9 175 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 ZNF785A8K8V0 405 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 WRBO00258 174 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 CLN5O75503 358 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 SCGB1D2O95969 90 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 CD7P09564 240 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 C8orf88P0DMB2 117 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 ELLP55199 621 aaPredicted RBP9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 CD81P60033 236 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 POLR2GP62487 172 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 MZT2BQ6NZ67 158 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 TOMM20LQ6UXN7 152 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 OR2K2Q8NGT1 345 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 ENKURQ8TC29 256 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 RNASEH2CQ8TDP1 164 aaKnown RBP9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 MITD1Q8WV92 249 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 OR10C1Q96KK4 312 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 ZFAND3Q9H8U3 227 aa9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 TECRQ9NZ01 308 aaKnown RBP9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 PUS1Q9Y606 427 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMARCD3-213ENST00000489503 IGHV3-66A0A0C4DH42 116 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 FAM90A26D6RGX4 464 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 SYNGR2O43760 224 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 IFNA21P01568 189 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 IGKV1-17P01599 117 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 IFNA4P05014 189 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 FRMD6-AS1P0C7T7 363 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 IGLC1P0CG04 106 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 IGHV4-30-4P0DP06 118 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 DCTN2Q13561 401 aaKnown RBP9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 IAH1Q2TAA2 248 aaPredicted RBP9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 ZNF600Q6ZNG1 722 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 OR4D5Q8NGN0 318 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 ZNF431Q8TF32 576 aaPredicted RBP9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 MARC2Q969Z3 335 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 MRPL27Q9P0M9 148 aaKnown RBP9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 CACFD1Q9UGQ2 172 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 U3KQ87 197 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 COL7A1Q02388 2944 aa9.22□□□□□ -0.93
SMARCD3-213ENST00000489503 IGHV7-4-1A0A0J9YVY3 117 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms