RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 K7EIM0 57 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 CENPVQ7Z7K6 275 aaPredicted RBP16.36■□□□□ 0.21
SND1-214ENST00000489417 NOL4LQ96MY1 436 aaPredicted RBP16.36■□□□□ 0.21
SND1-214ENST00000489417 ZNF702PQ9H963 129 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 ESM1Q9NQ30 184 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 PLA2G2EQ9NZK7 142 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 THYN1Q9P016 225 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 MRPL36Q9P0J6 103 aaKnown RBP16.36■□□□□ 0.21
SND1-214ENST00000489417 ANK3Q12955 4377 aaKnown RBP16.36■□□□□ 0.21
SND1-214ENST00000489417 C17orf112F2Z3M2 114 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 OR2J3O76001 311 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 RND2P52198 227 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 TMEM182Q6ZP80 229 aaPredicted RBP16.36■□□□□ 0.21
SND1-214ENST00000489417 ZNF709Q8N972 641 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 NPIPB3Q92617 1050 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 MGST2Q99735 147 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 ZNF355PQ9NSJ1 428 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 MXRA5Q9NR99 2828 aa16.35■□□□□ 0.21
SND1-214ENST00000489417 CLDN34H7C241 214 aa16.35■□□□□ 0.21
SND1-214ENST00000489417 SOX15O60248 233 aa16.35■□□□□ 0.21
SND1-214ENST00000489417 NDUFB8O95169 186 aa16.35■□□□□ 0.21
SND1-214ENST00000489417 RAB31Q13636 194 aa16.35■□□□□ 0.21
SND1-214ENST00000489417 GGTLC1Q9BX51 225 aa16.35■□□□□ 0.21
SND1-214ENST00000489417 FBXL7Q9UJT9 491 aa16.35■□□□□ 0.21
SND1-214ENST00000489417 CAMLGP49069 296 aa16.34■□□□□ 0.21
SND1-214ENST00000489417 SULT1A2P50226 295 aa16.34■□□□□ 0.21
SND1-214ENST00000489417 TMEM95Q3KNT9 176 aa16.34■□□□□ 0.21
SND1-214ENST00000489417 ACSM6Q6P461 480 aa16.34■□□□□ 0.21
SND1-214ENST00000489417 THAP8Q8NA92 274 aa16.34■□□□□ 0.21
SND1-214ENST00000489417 TMEM116Q8NCL8 245 aa16.34■□□□□ 0.21
SND1-214ENST00000489417 RNF141Q8WVD5 230 aa16.34■□□□□ 0.21
SND1-214ENST00000489417 IGKV1OR2-108A0A075B7D4 117 aa16.33■□□□□ 0.2
SND1-214ENST00000489417 TRBV9A0A0B4J1U6 114 aa16.33■□□□□ 0.2
SND1-214ENST00000489417 AGPAT2O15120 278 aa16.33■□□□□ 0.2
SND1-214ENST00000489417 PPIFP30405 207 aaKnown RBP16.33■□□□□ 0.2
SND1-214ENST00000489417 RAB14P61106 215 aa16.33■□□□□ 0.2
SND1-214ENST00000489417 SERF2P84101 59 aa16.33■□□□□ 0.2
SND1-214ENST00000489417 KCNIP2Q9NS61 270 aa16.33■□□□□ 0.2
SND1-214ENST00000489417 UMAD1C9J7I0 102 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 H3BUA1 57 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 FAM157CP0CG43 387 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 OR10J1P30954 320 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 RHOGP84095 191 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 DEFA5Q01523 94 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 CFHR3Q02985 330 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 AKR1C8PQ5T2L2 129 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 Q8N2B8 174 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 OR4X1Q8NH49 305 aa16.32■□□□□ 0.2
SND1-214ENST00000489417 PCNPQ8WW12 178 aaKnown RBP16.32■□□□□ 0.2
SND1-214ENST00000489417 SONP18583 2426 aaKnown RBP16.32■□□□□ 0.2
SND1-214ENST00000489417 FAM181BA6NEQ2 426 aa16.31■□□□□ 0.2
SND1-214ENST00000489417 BRI3O95415 125 aa16.31■□□□□ 0.2
SND1-214ENST00000489417 RNASE1P07998 156 aaKnown RBP16.31■□□□□ 0.2
SND1-214ENST00000489417 RAB5CP51148 216 aa16.31■□□□□ 0.2
SND1-214ENST00000489417 HILS1P60008 231 aa16.31■□□□□ 0.2
SND1-214ENST00000489417 CLLU1Q5K131 121 aa16.31■□□□□ 0.2
SND1-214ENST00000489417 NECAP1Q8NC96 275 aa16.31■□□□□ 0.2
SND1-214ENST00000489417 LRRC20Q8TCA0 184 aa16.31■□□□□ 0.2
SND1-214ENST00000489417 MS4A10Q96PG2 267 aa16.31■□□□□ 0.2
SND1-214ENST00000489417 IGKV1D-37A0A075B6S9 117 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 MFSD2BA6NFX1 497 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 ZFP92A6NM28 416 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 NMBP08949 121 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 ELLP55199 621 aaPredicted RBP16.3■□□□□ 0.2
SND1-214ENST00000489417 FFAR4Q5NUL3 377 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 MIC13Q5XKP0 118 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 VN1R17PQ8TDU5 208 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 JMJD8Q96S16 334 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 C21orf62Q9NYP8 219 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 SLC45A2Q9UMX9 530 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 PXMP4Q9Y6I8 212 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 S4R3C0 116 aa16.3■□□□□ 0.2
SND1-214ENST00000489417 CLN5O75503 358 aa16.29■□□□□ 0.2
SND1-214ENST00000489417 RPL29P47914 159 aaKnown RBP16.29■□□□□ 0.2
SND1-214ENST00000489417 NPBWR1P48145 328 aa16.29■□□□□ 0.2
SND1-214ENST00000489417 MFAP4P55083 255 aa16.29■□□□□ 0.2
SND1-214ENST00000489417 CYP2G1PQ6ZSU1 146 aa16.29■□□□□ 0.2
SND1-214ENST00000489417 TRGV9Q99603 122 aa16.29■□□□□ 0.2
SND1-214ENST00000489417 HIVEP2P31629 2446 aa16.29■□□□□ 0.2
SND1-214ENST00000489417 TCRBV4S1A1TA0A5B7 111 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 FAM223BA6NKX1 122 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 ZNF705EA8MWA4 302 aaPredicted RBP16.28■□□□□ 0.2
SND1-214ENST00000489417 TSPAN15O95858 294 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 IGLV1-40P01703 118 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 TRGV3P03979 118 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 RPL15P61313 204 aaKnown RBP16.28■□□□□ 0.2
SND1-214ENST00000489417 C15orf32Q32M92 178 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 TMEM41BQ5BJD5 291 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 FAM223AQ8IWN6 122 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 STPG3Q8N7X2 389 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 CXorf58Q96LI9 332 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 CRLF1O75462 422 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 MBP02144 154 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 B2MP61769 119 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 PRR20EP86478 221 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 PRR20CP86479 221 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 PRR20DP86480 221 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 PRR20BP86481 221 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 PRR20AP86496 221 aa16.28■□□□□ 0.2
SND1-214ENST00000489417 BPIFCQ8NFQ6 507 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms