RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 IGLL5B9A064 214 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 C11orf94C9JXX5 98 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 CLN5O75503 358 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 IFNA17P01571 189 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 RBMY1A1P0DJD3 496 aaKnown RBP9□□□□□ -0.97
CPSF3-204ENST00000489403 RBMY1CP0DJD4 496 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 PGAM2P15259 253 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 C4BPBP20851 252 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 NPPCP23582 126 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 HOXA1P49639 335 aaPredicted RBP9□□□□□ -0.97
CPSF3-204ENST00000489403 AKR1C2P52895 323 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 PPP5CP53041 499 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 PIGPP57054 158 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 NCS1P62166 190 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 RBMY1FQ15415 496 aaKnown RBP9□□□□□ -0.97
CPSF3-204ENST00000489403 MLANAQ16655 118 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 STXBP6Q8NFX7 210 aa9□□□□□ -0.97
CPSF3-204ENST00000489403 ZNF486Q96H40 463 aaPredicted RBP9□□□□□ -0.97
CPSF3-204ENST00000489403 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 A0A0G2JRQ6 117 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 A0A1W2PS18 150 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 KNCNA6PVL3 124 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 ZNF705EA8MWA4 302 aaPredicted RBP8.99□□□□□ -0.97
CPSF3-204ENST00000489403 HPGDSO60760 199 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 ZNF688P0C7X2 276 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 SPP1P10451 314 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 MIFP14174 115 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 ELK1P19419 428 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 CRYBB3P26998 211 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 OPRK1P41145 380 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 P2RY1P47900 373 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 TMEM41BQ5BJD5 291 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 RNASE12Q5GAN4 147 aaKnown RBP8.99□□□□□ -0.97
CPSF3-204ENST00000489403 Q6ZTC4 211 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 OR4X1Q8NH49 305 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 DCANP1Q8TF63 244 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 GRAMD2BQ96HH9 432 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 METTL26Q96S19 204 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 PDCD10Q9BUL8 212 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 KLK11Q9UBX7 282 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 X6R8D5 127 aa8.99□□□□□ -0.97
CPSF3-204ENST00000489403 A0A087WXM4 84 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 C3orf85A0A1B0GTC6 90 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 CD3DP04234 171 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 ETV6P41212 452 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 SUB1P53999 127 aaKnown RBP eCLIP8.98□□□□□ -0.974e-10■■■□□ 14.7
CPSF3-204ENST00000489403 VBP1P61758 197 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 TRIM16LQ309B1 348 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 BSXQ3C1V8 233 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 SP6Q3SY56 376 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 RNASE10Q5GAN6 216 aaKnown RBP8.98□□□□□ -0.97
CPSF3-204ENST00000489403 MORN3Q6PF18 240 aaPredicted RBP8.98□□□□□ -0.97
CPSF3-204ENST00000489403 TMEM230Q96A57 120 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 VCX3AQ9NNX9 186 aa8.98□□□□□ -0.97
CPSF3-204ENST00000489403 ELOA3CA0A087WX78 387 aaPredicted RBP8.97□□□□□ -0.97
CPSF3-204ENST00000489403 ATG12O94817 140 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 IGKV1-17P01599 117 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 UCP1P25874 307 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 HLA-DMBP28068 263 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 RPL5P46777 297 aaKnown RBP8.97□□□□□ -0.97
CPSF3-204ENST00000489403 TIGITQ495A1 244 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 ARRDC1Q8N5I2 433 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 FUNDC2Q9BWH2 189 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 ENY2Q9NPA8 101 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 CLEC5AQ9NY25 188 aa8.97□□□□□ -0.97
CPSF3-204ENST00000489403 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 FAM25AB3EWG3 89 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 FAM25CB3EWG5 89 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 FAM25GB3EWG6 89 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 SCGB2A1O75556 95 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 ACTL10Q5JWF8 245 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 Q6ZRM9 215 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 CSNK1G2-AS1Q8NCQ2 148 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 OR4D10Q8NGI6 311 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 OR52I2Q8NH67 350 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 RRNAD1Q96FB5 475 aaKnown RBP8.96□□□□□ -0.98
CPSF3-204ENST00000489403 NARS2Q96I59 477 aaKnown RBP8.96□□□□□ -0.98
CPSF3-204ENST00000489403 COPZ2Q9P299 210 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 CELA1Q9UNI1 258 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 U3KQE9 123 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.98
CPSF3-204ENST00000489403 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 TNFAIP8O95379 198 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 IGLC1P0CG04 106 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 DHRS2Q13268 280 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 CCDC71LQ8N9Z2 235 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 OR13C8Q8NGS7 320 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 RNASE11Q8TAA1 199 aaKnown RBP8.95□□□□□ -0.98
CPSF3-204ENST00000489403 ZFAND1Q8TCF1 268 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 GLMPQ8WWB7 406 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 MTFP1Q9UDX5 166 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 TBC1D24Q9ULP9 559 aa8.95□□□□□ -0.98
CPSF3-204ENST00000489403 TRAV30A0A087WSZ9 112 aa8.94□□□□□ -0.98
CPSF3-204ENST00000489403 RPS10-NUDT3A0A1W2PQS6 291 aa8.94□□□□□ -0.98
CPSF3-204ENST00000489403 CD74P04233 296 aa8.94□□□□□ -0.98
CPSF3-204ENST00000489403 HNRNPCP07910 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
CPSF3-204ENST00000489403 TBPP20226 339 aa8.94□□□□□ -0.98
CPSF3-204ENST00000489403 HTR2BP41595 481 aa8.94□□□□□ -0.98
CPSF3-204ENST00000489403 RORCP51449 518 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms