RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 F8W735 103 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-218ENST00000489037 NXPH3O95157 252 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 CNPY1Q3B7I2 92 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 NMSQ5H8A3 153 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 SLC24A4Q8NFF2 622 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 WDR89Q96FK6 387 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-218ENST00000489037 GINS3Q9BRX5 216 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 ZMAT4Q9H898 229 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 U3KQK5 164 aa10.78□□□□□ -0.68
BRCA1-218ENST00000489037 SCAF4O95104 1147 aaKnown RBP10.77□□□□□ -0.69
BRCA1-218ENST00000489037 NDUFB6O95139 128 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 IFNA10P01566 189 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 IL7P13232 177 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 BMI1P35226 326 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 TNFRSF9Q07011 255 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 PPP1R1AQ13522 171 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 BSXQ3C1V8 233 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 C2orf83Q53S99 150 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 PVRIGQ6DKI7 326 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 ETFRF1Q6IPR1 90 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 SBSPONQ8IVN8 264 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 TMEM61Q8N0U2 210 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 LRTM2Q8N967 370 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 OR52B4Q8NGK2 314 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 RNASEH2CQ8TDP1 164 aaKnown RBP10.77□□□□□ -0.69
BRCA1-218ENST00000489037 TMED3Q9Y3Q3 217 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 SELENOKQ9Y6D0 94 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 U3KQ87 197 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 DNAH9Q9NYC9 4486 aa10.77□□□□□ -0.69
BRCA1-218ENST00000489037 IGHV3OR16-8A0A075B7F1 116 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 TRAV30A0A087WSZ9 112 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 ZNF207O43670 478 aaKnown RBP10.76□□□□□ -0.69
BRCA1-218ENST00000489037 CLN5O75503 358 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 MED6O75586 246 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 TMEM50AO95807 157 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 SLC25A4P12235 298 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 NPY1RP25929 384 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 ZNF600Q6ZNG1 722 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 DTD1Q8TEA8 209 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 SDHCQ99643 169 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-218ENST00000489037 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 HSPB7Q9UBY9 170 aa10.76□□□□□ -0.69
BRCA1-218ENST00000489037 TRAV14DV4A0A0A6YYC5 116 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 OR11H12B2RN74 326 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 CD7P09564 240 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 SLC25A6P12236 298 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 ATP5IP56385 69 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-218ENST00000489037 LINC00299Q6ZSB3 139 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 TMEM116Q8NCL8 245 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 OR4X1Q8NH49 305 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 COQ8AQ8NI60 647 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 S100ZQ8WXG8 99 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 RBKSQ9H477 322 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 SMPXQ9UHP9 88 aa10.75□□□□□ -0.69
BRCA1-218ENST00000489037 IGHV7-4-1A0A0J9YVY3 117 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 C9orf170A2RU37 121 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 FAM90A26D6RGX4 464 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 IFNA21P01568 189 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 IFNA4P05014 189 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 HOXB5P09067 269 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 MLANAQ16655 118 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 C4orf46Q504U0 113 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 OR10C1Q96KK4 312 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 WWC2-AS2Q96NR7 200 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 SPAG8Q99932 426 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-218ENST00000489037 CCDC32Q9BV29 185 aa10.74□□□□□ -0.69
BRCA1-218ENST00000489037 FNDC4Q9H6D8 234 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-218ENST00000489037 PUS1Q9Y606 427 aaKnown RBP eCLIP10.74□□□□□ -0.69
BRCA1-218ENST00000489037 TSPAN4O14817 238 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 LYRM1O43325 122 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 CD5P06127 495 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 OR4E1P0C645 316 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 RAB11AP62491 216 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 RPP30P78346 268 aaKnown RBP10.73□□□□□ -0.69
BRCA1-218ENST00000489037 TOMM20LQ6UXN7 152 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 DEFB125Q8N687 156 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 NARS2Q96I59 477 aaKnown RBP10.73□□□□□ -0.69
BRCA1-218ENST00000489037 CIB3Q96Q77 187 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-218ENST00000489037 RHPN1-AS1Q9BWJ2 59 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 TMEM231Q9H6L2 316 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 SRD5A3Q9H8P0 318 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 FLVCR2Q9UPI3 526 aa10.73□□□□□ -0.69
BRCA1-218ENST00000489037 OR4C46A6NHA9 309 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 CHEK1O14757 476 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 PITX3O75364 302 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 RND2P52198 227 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 GGNBP1Q5YKI7 109 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 LYG2Q86SG7 212 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 OR1S2Q8NGQ3 325 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 Q8WTZ3 238 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 RCHY1Q96PM5 261 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 PAIP2BQ9ULR5 123 aaKnown RBP10.72□□□□□ -0.69
BRCA1-218ENST00000489037 COL7A1Q02388 2944 aa10.72□□□□□ -0.69
BRCA1-218ENST00000489037 IGHV3-49A0A0A0MS15 119 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 A0A1W2PS18 150 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 A6NHS1 94 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 ANXA7P20073 488 aaKnown RBP10.71□□□□□ -0.69
BRCA1-218ENST00000489037 NPPCP23582 126 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 CMC4P56277 68 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-218ENST00000489037 PAFAH1B2P68402 229 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms