RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-208	ENST00000488536	IGFBPL1	Q8WX77	278 aa		11.22	□□□□□ -0.61
UBA7-208	ENST00000488536	PERP	Q96FX8	193 aa		11.22	□□□□□ -0.61
UBA7-208	ENST00000488536	SPOCK3	Q9BQ16	436 aa		11.22	□□□□□ -0.61
UBA7-208	ENST00000488536	FBXL15	Q9H469	300 aa		11.22	□□□□□ -0.61
UBA7-208	ENST00000488536	TNFRSF19	Q9NS68	423 aa		11.22	□□□□□ -0.61
UBA7-208	ENST00000488536	IGKV1D-37	A0A075B6S9	117 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	TRAV9-1	A0A075B6T8	112 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	C5orf52	A6NGY3	159 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	OR7C2	O60412	319 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	CNIH1	O95406	144 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	PFN1	P07737	140 aa	Known RBP	11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	DEFA4	P12838	97 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	NPPC	P23582	126 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	BRS3	P32247	399 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	C5orf64	Q2M2E5	130 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	SPATA31B1P	Q5VZV4	182 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	ZNF562	Q6V9R5	426 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	C16orf82	Q7Z2V1	217 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	OR4X1	Q8NH49	305 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	TMEM37	Q8WXS4	190 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	MISP3	Q96FF7	219 aa		11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	EAF1	Q96JC9	268 aa	Predicted RBP	11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	ZNF48	Q96MX3	618 aa	Predicted RBP	11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	SAV1	Q9H4B6	383 aa	Predicted RBP	11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.21	□□□□□ -0.61
UBA7-208	ENST00000488536	TRAV30	A0A087WSZ9	112 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	NPIPB5	A8MRT5	1133 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	UBE2C	O00762	179 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	SCGB2A1	O75556	95 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	EIF3G	O75821	320 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	S100A8	P05109	93 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	HOXB4	P17483	251 aa	Predicted RBP	11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	CNTFR	P26992	372 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	LMO4	P61968	165 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	MLANA	Q16655	118 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	SMUG1	Q53HV7	270 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536		Q8N6K4	173 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	OR51G1	Q8NGK1	321 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	SRD5A3	Q9H8P0	318 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	RNF24	Q9Y225	148 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	DCHS1	Q96JQ0	3298 aa		11.2	□□□□□ -0.62
UBA7-208	ENST00000488536	MDFIC2	A0A1B0GVS7	189 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	C19orf84	I3L1E1	186 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	AP4M1	O00189	453 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	GGCT	O75223	188 aa	Known RBP	11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	HYPM	O75409	117 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	TOX4	O94842	621 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	TYMS	P04818	313 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	FAM106CP	P0CH98	169 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	GALR1	P47211	349 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	TAS2R60	P59551	318 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	FAM122A	Q96E09	287 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536	FAM167A-AS1	Q96KT0	104 aa		11.19	□□□□□ -0.62
UBA7-208	ENST00000488536		I3L2K1	104 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	S100A9	P06702	114 aa	Known RBP	11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	CXCL1	P09341	107 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	ZFP36	P26651	326 aa	Known RBP	11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	MFAP2	P55001	183 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	FAM3B	P58499	235 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	UBE2L3	P68036	154 aa	Known RBP	11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	SSBP2	P81877	361 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	RPL19	P84098	196 aa	Known RBP	11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	FOXL1	Q12952	345 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	FXYD3	Q14802	87 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	LDLRAD2	Q5SZI1	272 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	OR5AU1	Q8NGC0	362 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	ZNF503	Q96F45	646 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	PIMREG	Q9BSJ6	248 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	PAXX	Q9BUH6	204 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	SLC25A2	Q9BXI2	301 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	OR51M1	Q9H341	326 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	ZNF355P	Q9NSJ1	428 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	THYN1	Q9P016	225 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	HILPDA	Q9Y5L2	63 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	TNC	P24821	2201 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	NCOR2	Q9Y618	2525 aa		11.18	□□□□□ -0.62
UBA7-208	ENST00000488536	LAMA5	O15230	3695 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	SCO2	A0A1W2PP80	73 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	HELT	A6NFD8	242 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	PPP5D1	E7EU14	171 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	REG1A	P05451	166 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	S100A7	P31151	101 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	DSCR9	P59020	149 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	KIAA0141	Q14154	515 aa	Predicted RBP	11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	ZNF343	Q6P1L6	599 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	ZFP82	Q8N141	532 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	TTC9C	Q8N5M4	171 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	SMIM12	Q96EX1	92 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	SFRP2	Q96HF1	295 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	TMEM68	Q96MH6	324 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	WNT10A	Q9GZT5	417 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	URGCP-MRPS24	S4R325	110 aa		11.17	□□□□□ -0.62
UBA7-208	ENST00000488536	FCN1	O00602	326 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	OR10J4	P0C629	311 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	HIST1H1B	P16401	226 aa	Known RBP	11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	GATA2	P23769	480 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	DLX1	P56177	255 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	KLRD1	Q13241	179 aa		11.16	□□□□□ -0.62
UBA7-208	ENST00000488536	HES1	Q14469	280 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms