RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 MRPL27Q9P0M9 148 aaKnown RBP6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 LY96Q9Y6Y9 160 aa6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 SBF2Q86WG5 1849 aa6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 SCN10AQ9Y5Y9 1956 aa6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 NPFFO15130 113 aa6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 GNG5P63218 68 aa6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 RPP25LQ8N5L8 163 aaKnown RBP6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 DEFB123Q8N688 67 aa6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 NUP37Q8NFH4 326 aa6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 ASCL2Q99929 193 aa6.92□□□□□ -1.3
MCF2L2-212ENST00000488149 UPK2O00526 184 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 CEACAM4O75871 244 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 LYZL4Q96KX0 146 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 COX11Q9Y6N1 276 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 EREGO14944 169 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 C3orf79P0CE67 100 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 GLRXP35754 106 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 TRAV8-4A0A0B4J246 113 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 MPV17L2Q567V2 206 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 FAM166AQ6J272 317 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 LOXL4Q96JB6 756 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 C20orf144Q9BQM9 153 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 FOXA2Q9Y261 457 aaPredicted RBP6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 FANCMQ8IYD8 2048 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 TCRBV4S1A1TA0A5B7 111 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 SNRPD3P62318 126 aaKnown RBP6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 MAJINQ3KP22 176 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 SFTA2Q6UW10 78 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 WBP1Q96G27 269 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 ORMDL2Q53FV1 153 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 SLC25A48Q6ZT89 311 aaKnown RBP6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 FGF11Q92914 225 aa6.91□□□□□ -1.3
MCF2L2-212ENST00000488149 A0A0G2JMZ2 1700 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 LRRC37A2A6NM11 1700 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 LRRC37AA6NMS7 1700 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 NMSQ5H8A3 153 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 RAX2Q96IS3 184 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 CD5LO43866 347 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 FOXC1Q12948 553 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 CD69Q07108 199 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 GGTLC1Q9BX51 225 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 C21orf62Q9NYP8 219 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 CRIM1Q9NZV1 1036 aa6.9□□□□□ -1.3
MCF2L2-212ENST00000488149 TREML4Q6UXN2 200 aa6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 ZNF319Q9P2F9 582 aa6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 BCL6BQ8N143 479 aaPredicted RBP6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 DOCK6Q96HP0 2047 aa6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 GTSF1LQ9H1H1 148 aa6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 LINC01549A6NIU2 74 aa6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 IQCF6A8MYZ5 107 aa6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 PYYP10082 97 aa6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 PSG1P11464 419 aa6.9□□□□□ -1.31
MCF2L2-212ENST00000488149 CASP8AP2Q9UKL3 1982 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 IGHV3-35A0A0C4DH35 117 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 ZNF815PA8K554 130 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 SAA1P0DJI8 122 aaPredicted RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 CDCP2Q5VXM1 449 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 SLX1AQ9BQ83 275 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 FBXL15Q9H469 300 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 MED12Q93074 2177 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 SHANK3Q9BYB0 1731 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PLNP26678 52 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PRCDQ00LT1 54 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PAX2Q02962 417 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 GUSBP1Q15486 140 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 LCN12Q6JVE5 192 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 ZNF837Q96EG3 531 aaPredicted RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PSG8Q9UQ74 426 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 IGHV4-39P01824 125 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PSG7Q13046 419 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 A0A087X0K7 114 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 MORN2Q502X0 79 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PVRIGQ6DKI7 326 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 TMEM14EPQ6UXP3 125 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 SNHG12Q9BXW3 62 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 MRPL20Q9BYC9 149 aaKnown RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 DIDO1Q9BTC0 2240 aaKnown RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PATE3B3GLJ2 98 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 F2Z2F3 143 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 SYS1-DBNDD2H3BUS1 97 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PAX1P15863 534 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 DUTP33316 252 aaKnown RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 MST1LQ2TV78 715 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 C1orf162Q8NEQ5 155 aaPredicted RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 TMEM171Q8WVE6 324 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 CHTOPQ9Y3Y2 248 aaKnown RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 LINC00312Q9Y6C7 94 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PHF3Q92576 2039 aaKnown RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 DOPEY2Q9Y3R5 2298 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 FER1L5A0AVI2 2057 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 SAA2-SAA4A0A096LPE2 208 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 PSMB11A5LHX3 300 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 SAA2P0DJI9 122 aaPredicted RBP6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 FAM90A2PQ658T7 463 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 KIR3DL3Q8N743 410 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 DCTN5Q9BTE1 182 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 YAE1D1Q9NRH1 226 aa6.89□□□□□ -1.31
MCF2L2-212ENST00000488149 BRCA1P38398 1863 aaKnown RBP6.88□□□□□ -1.31
MCF2L2-212ENST00000488149 LOC285556D6RIA3 1793 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms