RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 FAM215AQ9Y5M1 114 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 RTEL1-TNFRSF6BF6WH68 1400 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 ABCC12Q96J65 1359 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 SHANK3Q9BYB0 1731 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 TRGV5A0A0B4J1U4 118 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 TRAV4A0A0B4J268 109 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 GGT3PA6NGU5 568 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 RIIAD1A6NNX1 92 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 CLDN25C9JDP6 229 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 LEPROTO15243 131 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 PIAS1O75925 651 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 HMGN1P05114 100 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 RPS4Y1P22090 263 aaKnown RBP1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 S100A4P26447 101 aaKnown RBP1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 GLRXP35754 106 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 EMP1P54849 157 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 PIGPP57054 158 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 DEFA3P59666 94 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 YPEL3P61236 119 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 RPL18Q07020 188 aaKnown RBP1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 TMEM128Q5BJH2 165 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 SPANXN3Q5MJ09 141 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 TOMM20LQ6UXN7 152 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 ZNF705AQ6ZN79 300 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 C2orf91Q6ZV80 131 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 TRAPPC6BQ86SZ2 158 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 CROCCP2Q86T23 111 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 CLVS1Q8IUQ0 354 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 ZNF675Q8TD23 568 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 SMCR5Q8TEV8 140 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 MBD3L1Q8WWY6 194 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 LZICQ8WZA0 190 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 H1FXQ92522 213 aaKnown RBP1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 DERL1Q9BUN8 251 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 RNF122Q9H9V4 155 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 SLC39A9Q9NUM3 307 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 SPANXCQ9NY87 97 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 FMN1Q68DA7 1419 aa1.46□□□□□ -2.18
HMGB1P36-201ENST00000487709 NEO1Q92859 1461 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 DUXBA0A1W2PPF3 345 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 A0A1W2PRE2 83 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 PRORSD1PA6NEY8 169 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 ARL5CA6NH57 179 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 FABP5P3A8MUU1 101 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 CYB5BO43169 146 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 CREBL2O60519 120 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 DHFRP00374 187 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 IGKV1-5P01602 117 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 TFPTP0C1Z6 253 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 CA5AP35218 305 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 GTF2A1P52655 376 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 TMEM258P61165 79 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 SURF2Q15527 256 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 MIAQ16674 131 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 DEFB119Q8N690 84 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 CLDND2Q8NHS1 167 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 MAFIPQ8WZ33 124 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 PLEKHB2Q96CS7 222 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 DOHHQ9BU89 302 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 EFCAB11Q9BUY7 163 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 TTTY13Q9BZ97 58 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 C16orf95Q9H693 158 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 MED11Q9P086 117 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 CKLFQ9UBR5 152 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 HHLA3Q9XRX5 114 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 AMMECR1Q9Y4X0 333 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 TIMM9Q9Y5J7 89 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 HECW2Q9P2P5 1572 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 KIF24Q5T7B8 1368 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 CHD2O14647 1828 aaKnown RBP1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 ATAD5Q96QE3 1844 aa1.45□□□□□ -2.18
HMGB1P36-201ENST00000487709 SORL1Q92673 2214 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 DENND4BO75064 1496 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 UHRF1BP1Q6BDS2 1440 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 IGHV3-64A0A075B6Q5 118 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 IGKV1D-43A0A0B4J1Z2 117 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 A0A0G2JQZ4 141 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 A0A0J9YW62 118 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 IGKV2-29A2NJV5 120 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 CST8O60676 142 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 FAM107AO95990 144 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 IGHV3-7P01780 117 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 OR10J4P0C629 311 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 ZNF728P0DKX0 622 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 PSMB8P28062 276 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 HLA-DMBP28068 263 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 PEBP1P30086 187 aaKnown RBP1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 BCL2L15Q5TBC7 163 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 LCA10Q71F78 164 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 EXOC3-AS1Q8N2X6 119 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 NUP35Q8NFH5 326 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 OR9Q1Q8NGQ5 310 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 OR10J5Q8NHC4 309 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 DNAJC9Q8WXX5 260 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 SCGB3A1Q96QR1 104 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 OR2J1Q9GZK6 312 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 LRTM1Q9HBL6 345 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 TP73-AS1Q9UF72 201 aa1.44□□□□□ -2.18
HMGB1P36-201ENST00000487709 TIMM22Q9Y584 194 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms