RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 IGHV3-23P01764 117 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 HSMCR30P0CW71 290 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 DEFA4P12838 97 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 AREGP15514 252 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 HIST1H1DP16402 221 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 NFYAP23511 347 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 DTYMKP23919 212 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 PTBP1P26599 531 aaKnown RBP eCLIP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 CMC4P56277 68 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 RPS25P62851 125 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 RPL30P62888 115 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 RPL8P62917 257 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 FABP5Q01469 135 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 MLLT11Q13015 90 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 EIF4EBP1Q13541 118 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 BAK1Q16611 211 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 DEFB135Q30KP9 77 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 HES5Q5TA89 166 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 OGFRL1Q5TC84 451 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 LAMTOR1Q6IAA8 161 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 CNIH2Q6PI25 160 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 PLET1Q6UQ28 207 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 BTNL8Q6UX41 500 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 UNQ9165/PRO28630Q6UXU0 137 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 C19orf35Q6ZS72 473 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 KCTD9Q7L273 389 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 VKORC1L1Q8N0U8 176 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 OR4S2Q8NH73 311 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 OR4A5Q8NH83 315 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 ZNF502Q8TBZ5 544 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 VN1R17PQ8TDU5 208 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 PHLDA1Q8WV24 401 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 MAFIPQ8WZ33 124 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 GALNT14Q96FL9 552 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 ATP6V0BQ99437 205 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 SRSF8Q9BRL6 282 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 ZNF436Q9C0F3 470 aaPredicted RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 DCSTAMPQ9H295 470 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 DUSP21Q9H596 190 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 BET1LQ9NYM9 111 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 THYN1Q9P016 225 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 RRP15Q9Y3B9 282 aaKnown RBP2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 TPRKBQ9Y3C4 175 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 SELENOKQ9Y6D0 94 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 S4R3C0 116 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 HERC2O95714 4834 aa2.88□□□□□ -1.95
SNRNP40-205ENST00000486941 IGKV1D-13A0A0B4J2D9 117 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 MFSD2BA6NFX1 497 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 OR4C46A6NHA9 309 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 MPTX1A8MV57 137 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 J3QRK9 145 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 K7EMT4 169 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 CASQ2O14958 399 aaPredicted RBP2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 CYB5BO43169 146 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 RBFOX2O43251 390 aaKnown RBP eCLIP2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 TGOLN2O43493 480 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 DEDDO75618 318 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 IGKV1-13P0DP09 117 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 HLA-GP17693 338 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 CRHBPP24387 322 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 GPR183P32249 361 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 TCTAP57738 103 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 TAS2R31P59538 309 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 OR2B8PP59922 312 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 RCN1Q15293 331 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 MSMO1Q15800 293 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 POU2AF1Q16633 256 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 CDNFQ49AH0 187 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 OR2B11Q5JQS5 317 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 HACD4Q5VWC8 232 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 THOC7Q6I9Y2 204 aaKnown RBP2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 HSD17B13Q7Z5P4 300 aaPredicted RBP2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 GATAD1Q8WUU5 269 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 TCTEX1D2Q8WW35 142 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 BSCL2Q96G97 398 aaPredicted RBP2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 MGLLQ99685 303 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 RARRES2Q99969 163 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 CCDC90BQ9GZT6 254 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 C6orf62Q9GZU0 229 aaPredicted RBP2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 MFFQ9GZY8 342 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 ATG5Q9H1Y0 275 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 VCXQ9H320 206 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 DAZ1Q9NQZ3 744 aaKnown RBP2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 UBQLN2Q9UHD9 624 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 ANXA10Q9UJ72 324 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 ELF5Q9UKW6 265 aaPredicted RBP2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 SPATA2Q9UM82 520 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 DNAH10Q8IVF4 4471 aa2.87□□□□□ -1.95
SNRNP40-205ENST00000486941 IGLV7-46A0A075B6I9 117 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 IGHV4-4A0A075B6R2 117 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 IGLV9-49A0A0B4J1Y8 123 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 IGHV3-35A0A0C4DH35 117 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 TRDV1A0A1B0GX56 115 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 IGLC7A0M8Q6 106 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 C15orf62A8K5M9 175 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 A8MU10 97 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 NDUFA4O00483 81 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 UPK2O00526 184 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 SCGNO76038 276 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 S1PR2O95136 353 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms