RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SPANXN5Q5MJ07 72 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 SIGLECL1Q8N7X8 197 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 SIGMAR1Q99720 223 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 TLNRD1Q9H1K6 362 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 NMNAT1Q9HAN9 279 aaPredicted RBP1.58□□□□□ -2.16
SMC4-218ENST00000486711 OSTCQ9NRP0 149 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 UQCC1Q9NVA1 299 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 OR5AC2Q9NZP5 309 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 CYSLTR1Q9Y271 337 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 ARL2BPQ9Y2Y0 163 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 SOX21Q9Y651 276 aaPredicted RBP1.58□□□□□ -2.16
SMC4-218ENST00000486711 RTL1A6NKG5 1358 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 RIC1Q4ADV7 1423 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 SETD5Q9C0A6 1442 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 TRAV14DV4A0A0A6YYC5 116 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 SHBGP04278 402 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 IFNA6P05013 189 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 CRYGAP11844 174 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 IL9P15248 144 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 MRPS15P82914 257 aaKnown RBP1.57□□□□□ -2.16
SMC4-218ENST00000486711 CDK5R1Q15078 307 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 RHEBQ15382 184 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 LIN52Q52LA3 116 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 Q6ZQT0 140 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 ZNF826PQ6ZT77 177 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 C2orf50Q96LR7 162 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 RNASE7Q9H1E1 156 aaKnown RBP1.57□□□□□ -2.16
SMC4-218ENST00000486711 MIXL1Q9H2W2 232 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 IDI2-AS1Q9NZ38 188 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 ROBO3Q96MS0 1386 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 PIK3C2GO75747 1445 aa1.57□□□□□ -2.16
SMC4-218ENST00000486711 J3QRK9 145 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 OR7C1O76099 320 aaPredicted RBP1.56□□□□□ -2.16
SMC4-218ENST00000486711 ZNF682O95780 498 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 SPI1P17947 270 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 FKBP2P26885 142 aaKnown RBP1.56□□□□□ -2.16
SMC4-218ENST00000486711 ZNF846Q147U1 533 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 TMED2Q15363 201 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 UNQ6190/PRO20217Q6UXQ8 127 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 PHF13Q86YI8 300 aaPredicted RBP1.56□□□□□ -2.16
SMC4-218ENST00000486711 TVP23BQ9NYZ1 205 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 MAST2Q6P0Q8 1798 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 KIF13BQ9NQT8 1826 aa1.56□□□□□ -2.16
SMC4-218ENST00000486711 IGKV1D-42A0A075B6H8 117 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 ATP5HO75947 161 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 OR2B3O76000 313 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 OR2J2O76002 312 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 ANGP03950 147 aaKnown RBP1.55□□□□□ -2.16
SMC4-218ENST00000486711 SMIM17P0DL12 118 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 ERVS71-1P61550 626 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 C12orf29Q8N999 325 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 OR52L1Q8NGH7 329 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 SLC25A40Q8TBP6 338 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 GNPDA2Q8TDQ7 276 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 SLC50A1Q9BRV3 221 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 CCDC144AA2RUR9 1427 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 GLI3P10071 1580 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 HECW2Q9P2P5 1572 aa1.55□□□□□ -2.16
SMC4-218ENST00000486711 IGKV3-7A0A075B6H7 116 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 C19orf84I3L1E1 186 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 CTSDP07339 412 aaPredicted RBP1.54□□□□□ -2.16
SMC4-218ENST00000486711 ARL14EPLP0DKL9 152 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 SURF2Q15527 256 aaPredicted RBP1.54□□□□□ -2.16
SMC4-218ENST00000486711 C10orf55Q5SWW7 151 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 TEX36Q5VZQ5 186 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 Q6Q795 121 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 C12orf45Q8N5I9 185 aaPredicted RBP1.54□□□□□ -2.16
SMC4-218ENST00000486711 C10orf105Q8TEF2 133 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 NHP2Q9NX24 153 aaKnown RBP1.54□□□□□ -2.16
SMC4-218ENST00000486711 FAM32AQ9Y421 112 aaKnown RBP1.54□□□□□ -2.16
SMC4-218ENST00000486711 NEO1Q92859 1461 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 NUMA1Q14980 2115 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 RTTNQ86VV8 2226 aa1.54□□□□□ -2.16
SMC4-218ENST00000486711 A0A087X0T9 212 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 ASAH2BP0C7U1 165 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 HSD11B1P28845 292 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 ERP29P30040 261 aaKnown RBP1.53□□□□□ -2.16
SMC4-218ENST00000486711 RHOBP62745 196 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 LINC01554Q52M75 96 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 LYRM7Q5U5X0 104 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 Q8N2B8 174 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 OR52R1Q8NGF1 315 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 GPR146Q96CH1 333 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 REG4Q9BYZ8 158 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 ENY2Q9NPA8 101 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 TAS2R4Q9NYW5 299 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 EPDR1Q9UM22 224 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
SMC4-218ENST00000486711 C1orf196B1AJZ1 125 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 SERPINA1P01009 418 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 OR4E1P0C645 316 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 BAALC-AS2P0C853 105 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 BRS3P32247 399 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 LCA10Q71F78 164 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 OR8D4Q8NGM9 314 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 FAM172AQ8WUF8 416 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 AQP3Q92482 292 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 DGCR14Q96DF8 476 aaKnown RBP1.52□□□□□ -2.17
SMC4-218ENST00000486711 PHB2Q99623 299 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 TRABDQ9H4I3 376 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms