RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 Q0VFX4 171 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 MRPL49Q13405 166 aaKnown RBP8.68□□□□□ -1.02
CCDC171-208ENST00000486641 LYSMD4Q5XG99 296 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 ACP7Q6ZNF0 438 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 BPIFA4PQ86YQ2 179 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 SPEM1Q8N4L4 309 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 TMEM251Q8N6I4 163 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 C7orf69Q9H7B7 122 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 TMEM14BQ9NUH8 114 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 GNG12Q9UBI6 72 aa8.68□□□□□ -1.02
CCDC171-208ENST00000486641 KLF13Q9Y2Y9 288 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-208ENST00000486641 NBEAQ8NFP9 2946 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 LY6G6EA0A0G2JKS1 128 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 FNDC10F2Z333 226 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 H3BUT2 72 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 LIPFP07098 398 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 PYYP10082 97 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 EDDM3AQ14507 147 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 ZNF329Q86UD4 541 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 FAM90A1Q86YD7 464 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 OR9G1Q8NH87 305 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 LRRC29Q8WV35 223 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 TNFRSF14Q92956 283 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 SGK494Q96LW2 274 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 AP1S3Q96PC3 154 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 C19orf24Q9BVV8 132 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 FOXA2Q9Y261 457 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-208ENST00000486641 LOXL2Q9Y4K0 774 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 TIMM8BQ9Y5J9 83 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-208ENST00000486641 U3KQA8 63 aa8.67□□□□□ -1.02
CCDC171-208ENST00000486641 H3BRM9 83 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 K7EP34 96 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 PEX7O00628 323 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 PRR7Q8TB68 274 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 C12orf49Q9H741 205 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 OBP2BQ9NPH6 170 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 LTBRP36941 435 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 ZNF137PP52743 207 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 GNG5P63218 68 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 RAB30Q15771 203 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 UTF1Q5T230 341 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 LINC01545Q5VT33 79 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 SAMD13Q5VXD3 122 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 SPINK14Q6IE38 97 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 LINC00322Q6ZN03 302 aaPredicted RBP8.66□□□□□ -1.02
CCDC171-208ENST00000486641 LINC00696Q6ZRV3 163 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 DDB2Q92466 427 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 PGLYRP4Q96LB8 373 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 TMUB1Q9BVT8 246 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 OR51B2Q9Y5P1 312 aa8.66□□□□□ -1.02
CCDC171-208ENST00000486641 GNG7O60262 68 aa8.65□□□□□ -1.02
CCDC171-208ENST00000486641 TBC1D28Q2M2D7 210 aa8.65□□□□□ -1.02
CCDC171-208ENST00000486641 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.02
CCDC171-208ENST00000486641 DOCK10Q96BY6 2186 aa8.65□□□□□ -1.02
CCDC171-208ENST00000486641 PSMB11A5LHX3 300 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 PPIAL4GP0DN37 164 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 CD177Q8N6Q3 437 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 TEX45Q8NA69 505 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 OR2K2Q8NGT1 345 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 OR10AG1Q8NH19 301 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 NDFIP1Q9BT67 221 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 RABAC1Q9UI14 185 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 HSPB8Q9UJY1 196 aa8.65□□□□□ -1.03
CCDC171-208ENST00000486641 A0A0G2JLM5 398 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 IQCF6A8MYZ5 107 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 NCR2O95944 276 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 FGF6P10767 208 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 CCL4P13236 92 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 MPV17P39210 176 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 CYB561P49447 251 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 C3AR1Q16581 482 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 BHLHA15Q7RTS1 189 aaPredicted RBP8.64□□□□□ -1.03
CCDC171-208ENST00000486641 UBALD2Q8IYN6 164 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 OR4A5Q8NH83 315 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 MRPL32Q9BYC8 188 aaKnown RBP8.64□□□□□ -1.03
CCDC171-208ENST00000486641 HILPDAQ9Y5L2 63 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 C9orf172C9J069 976 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 CSN3P07498 182 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 FOLR3P41439 243 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 KIR2DS2P43631 304 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 LOXL3P58215 753 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 NHLH1Q02575 133 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 IL11RAQ14626 422 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 KIR3DS1Q14943 382 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 WDR82Q6UXN9 313 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 LEAP2Q969E1 77 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 RAB37Q96AX2 223 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 CLUHP3Q96NS8 147 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 PAXXQ9BUH6 204 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 NPFFR1Q9GZQ6 430 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 RPP21Q9H633 154 aaKnown RBP8.64□□□□□ -1.03
CCDC171-208ENST00000486641 JKAMPQ9P055 326 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 JPT1Q9UK76 154 aa8.64□□□□□ -1.03
CCDC171-208ENST00000486641 VPS13AQ96RL7 3174 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 A6NDN8 102 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 KLK10O43240 276 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 GUSBP1Q15486 140 aa8.63□□□□□ -1.03
CCDC171-208ENST00000486641 S100A7AQ86SG5 101 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms