RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 GINS3Q9BRX5 216 aa13.71□□□□□ -0.21
CLDN11-206ENST00000486429 HEYLQ9NQ87 328 aaPredicted RBP13.71□□□□□ -0.21
CLDN11-206ENST00000486429 CACFD1Q9UGQ2 172 aa13.71□□□□□ -0.21
CLDN11-206ENST00000486429 A0A0B4J2A0 478 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 IGHV7-4-1A0A0J9YVY3 117 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 CEBPZOSA8MTT3 80 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 C3orf84H3BNL1 204 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 SUPT4H1P63272 117 aaKnown RBP13.7□□□□□ -0.22
CLDN11-206ENST00000486429 ZNF600Q6ZNG1 722 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 LGI3Q8N145 548 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 SLC24A4Q8NFF2 622 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 MUC7Q8TAX7 377 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 CITED4Q96RK1 184 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 SHPKQ9UHJ6 478 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 SMPXQ9UHP9 88 aa13.7□□□□□ -0.22
CLDN11-206ENST00000486429 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
CLDN11-206ENST00000486429 RPS10-NUDT3A0A1W2PQS6 291 aa13.69□□□□□ -0.22
CLDN11-206ENST00000486429 RBMY1BA6NDE4 496 aaKnown RBP13.69□□□□□ -0.22
CLDN11-206ENST00000486429 RBMY1EA6NEQ0 496 aaKnown RBP13.69□□□□□ -0.22
CLDN11-206ENST00000486429 NXPH3O95157 252 aa13.69□□□□□ -0.22
CLDN11-206ENST00000486429 RBMY1DP0C7P1 496 aaKnown RBP13.69□□□□□ -0.22
CLDN11-206ENST00000486429 NMSQ5H8A3 153 aa13.69□□□□□ -0.22
CLDN11-206ENST00000486429 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
CLDN11-206ENST00000486429 RHPN1-AS1Q9BWJ2 59 aa13.69□□□□□ -0.22
CLDN11-206ENST00000486429 FNDC4Q9H6D8 234 aaPredicted RBP13.69□□□□□ -0.22
CLDN11-206ENST00000486429 DNAH7Q8WXX0 4024 aa13.68□□□□□ -0.22
CLDN11-206ENST00000486429 OR4C46A6NHA9 309 aa13.68□□□□□ -0.22
CLDN11-206ENST00000486429 BMI1P35226 326 aa13.68□□□□□ -0.22
CLDN11-206ENST00000486429 TOMM20LQ6UXN7 152 aa13.68□□□□□ -0.22
CLDN11-206ENST00000486429 SLC25A21Q9BQT8 299 aaPredicted RBP13.68□□□□□ -0.22
CLDN11-206ENST00000486429 SRRQ9GZT4 340 aa13.68□□□□□ -0.22
CLDN11-206ENST00000486429 HIPK2Q9H2X6 1198 aa13.68□□□□□ -0.22
CLDN11-206ENST00000486429 RETNQ9HD89 108 aa13.68□□□□□ -0.22
CLDN11-206ENST00000486429 NBEAL2Q6ZNJ1 2754 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 IGHV3-49A0A0A0MS15 119 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 TRAV14DV4A0A0A6YYC5 116 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 CHEK1O14757 476 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 CLN5O75503 358 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 TMEM50AO95807 157 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 VAMP1P23763 118 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 INPP1P49441 399 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 CCR6P51684 374 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 SMCO1Q147U7 214 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 C2orf83Q53S99 150 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 TRIQKQ629K1 86 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 LYZL2Q7Z4W2 148 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 OR4X1Q8NH49 305 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 RNASEH2CQ8TDP1 164 aaKnown RBP13.67□□□□□ -0.22
CLDN11-206ENST00000486429 RNF2Q99496 336 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 GGTLC1Q9BX51 225 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 ZFAND3Q9H8U3 227 aa13.67□□□□□ -0.22
CLDN11-206ENST00000486429 MRPL36Q9P0J6 103 aaKnown RBP13.67□□□□□ -0.22
CLDN11-206ENST00000486429 PUS1Q9Y606 427 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLDN11-206ENST00000486429 DUXBA0A1W2PPF3 345 aa13.66□□□□□ -0.22
CLDN11-206ENST00000486429 NPY1RP25929 384 aa13.66□□□□□ -0.22
CLDN11-206ENST00000486429 TNFRSF9Q07011 255 aa13.66□□□□□ -0.22
CLDN11-206ENST00000486429 TMEM128Q5BJH2 165 aa13.66□□□□□ -0.22
CLDN11-206ENST00000486429 EDA2RQ9HAV5 297 aa13.66□□□□□ -0.22
CLDN11-206ENST00000486429 HSPB7Q9UBY9 170 aa13.66□□□□□ -0.22
CLDN11-206ENST00000486429 UBQLN2Q9UHD9 624 aa13.66□□□□□ -0.22
CLDN11-206ENST00000486429 KMT2CQ8NEZ4 4911 aaKnown RBP13.65□□□□□ -0.22
CLDN11-206ENST00000486429 IGHV3OR16-13A0A075B7E8 117 aa13.65□□□□□ -0.22
CLDN11-206ENST00000486429 LOC102724200A0A096LPH7 203 aaPredicted RBP13.65□□□□□ -0.22
CLDN11-206ENST00000486429 IGHV3-74A0A0B4J1X5 117 aa13.65□□□□□ -0.22
CLDN11-206ENST00000486429 ODF3L2Q3SX64 289 aa13.65□□□□□ -0.22
CLDN11-206ENST00000486429 NOXA1Q86UR1 476 aa13.65□□□□□ -0.22
CLDN11-206ENST00000486429 FAM110AQ9BQ89 295 aa13.65□□□□□ -0.22
CLDN11-206ENST00000486429 BATF3Q9NR55 127 aa13.65□□□□□ -0.22
CLDN11-206ENST00000486429 A0A1B0GU03 582 aa13.64□□□□□ -0.23
CLDN11-206ENST00000486429 SLC25A4P12235 298 aa13.64□□□□□ -0.23
CLDN11-206ENST00000486429 RBMS2Q15434 407 aaKnown RBP13.64□□□□□ -0.23
CLDN11-206ENST00000486429 MLANAQ16655 118 aa13.64□□□□□ -0.23
CLDN11-206ENST00000486429 CENPSQ8N2Z9 138 aa13.64□□□□□ -0.23
CLDN11-206ENST00000486429 OR1S1Q8NH92 325 aa13.64□□□□□ -0.23
CLDN11-206ENST00000486429 DTD1Q8TEA8 209 aa13.64□□□□□ -0.23
CLDN11-206ENST00000486429 TRAV30A0A087WSZ9 112 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 IFNA10P01566 189 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 LYL1P12980 280 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 RND2P52198 227 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 PPP1R1AQ13522 171 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 ETFRF1Q6IPR1 90 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 PRSS54Q6PEW0 395 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 ST8SIA2Q92186 375 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 RBKSQ9H477 322 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 TMEM231Q9H6L2 316 aa13.63□□□□□ -0.23
CLDN11-206ENST00000486429 IGKV3-7A0A075B6H7 116 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 NAP1L6A6NFF2 107 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 IGKV1-17P01599 117 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 CD5P06127 495 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 TFPI2P48307 235 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 BAK1Q16611 211 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 TIGITQ495A1 244 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 CASC10Q5T4H9 136 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 LRTM2Q8N967 370 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 OR1S2Q8NGQ3 325 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 METTL26Q96S19 204 aa13.62□□□□□ -0.23
CLDN11-206ENST00000486429 VSIRQ9H7M9 311 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms