RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 RELQ04864 619 aaPredicted RBP12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 ANKRD55Q3KP44 614 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 TOMM20LQ6UXN7 152 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 ZMAT4Q9H898 229 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 SRD5A3Q9H8P0 318 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 ZFAND3Q9H8U3 227 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 RETNQ9HD89 108 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 ENY2Q9NPA8 101 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 SHPKQ9UHJ6 478 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 SMPXQ9UHP9 88 aa12.42□□□□□ -0.42
CCHCR1-214ENST00000486060 CSMD3Q7Z407 3707 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 IGHV7-4-1A0A0J9YVY3 117 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 A0A1B0GU03 582 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 CHEK1O14757 476 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 TSPAN4O14817 238 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 SUB1P53999 127 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 C2orf83Q53S99 150 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 LGI3Q8N145 548 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 DUSP18Q8NEJ0 188 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 OR52B4Q8NGK2 314 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 DEDD2Q8WXF8 326 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 RNF2Q99496 336 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 HEYLQ9NQ87 328 aaPredicted RBP12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 HSPB7Q9UBY9 170 aa12.41□□□□□ -0.42
CCHCR1-214ENST00000486060 IGHV3OR16-13A0A075B7E8 117 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 IGHV3-74A0A0B4J1X5 117 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 CEBPZOSA8MTT3 80 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 CORTO00230 105 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 YIF1AO95070 293 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 APOHP02749 345 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 BTCP35070 178 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 OPRK1P41145 380 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 HTR2BP41595 481 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 NPBWR1P48145 328 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 TNFRSF9Q07011 255 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 PPP1R1AQ13522 171 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 SMCO1Q147U7 214 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 RBPMS2Q6ZRY4 209 aaKnown RBP12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 LILRB2Q8N423 598 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 OR4X1Q8NH49 305 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 SLC25A21Q9BQT8 299 aaPredicted RBP12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 RHPN1-AS1Q9BWJ2 59 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 AGRNO00468 2067 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 STARD9Q9P2P6 4700 aa12.4□□□□□ -0.42
CCHCR1-214ENST00000486060 PITX3O75364 302 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 CLN5O75503 358 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 IGKV1-17P01599 117 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 FAM90A2PQ658T7 463 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 SLC16A13Q7RTY0 426 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 LRTM2Q8N967 370 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 TMEM116Q8NCL8 245 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 SLC24A4Q8NFF2 622 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 SPAG8Q99932 426 aaPredicted RBP12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 HIPK2Q9H2X6 1198 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 RBKSQ9H477 322 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 UBQLN2Q9UHD9 624 aa12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 PUS1Q9Y606 427 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCHCR1-214ENST00000486060 SFT2D2O95562 160 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 ANXA3P12429 323 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 VAMP1P23763 118 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 SRPXP78539 464 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 PRSS54Q6PEW0 395 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 ZNF600Q6ZNG1 722 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 SPATA25Q9BR10 227 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 EDA2RQ9HAV5 297 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 FLVCR2Q9UPI3 526 aa12.38□□□□□ -0.43
CCHCR1-214ENST00000486060 RYR3Q15413 4870 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 TRAV14DV4A0A0A6YYC5 116 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 LINC00854A0A1B0GVQ3 168 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 NPY1RP25929 384 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 RBMS2Q15434 407 aaKnown RBP12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 TIGITQ495A1 244 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 CENPSQ8N2Z9 138 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 ST8SIA2Q92186 375 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 FAM110AQ9BQ89 295 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 VSIRQ9H7M9 311 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 NDUFA13Q9P0J0 144 aa12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 DYNC2H1Q8NCM8 4307 aaKnown RBP12.37□□□□□ -0.43
CCHCR1-214ENST00000486060 DUXBA0A1W2PPF3 345 aa12.36□□□□□ -0.43
CCHCR1-214ENST00000486060 NDUFB6O95139 128 aa12.36□□□□□ -0.43
CCHCR1-214ENST00000486060 IGLC1P0CG04 106 aa12.36□□□□□ -0.43
CCHCR1-214ENST00000486060 IL7P13232 177 aa12.36□□□□□ -0.43
CCHCR1-214ENST00000486060 RND2P52198 227 aa12.36□□□□□ -0.43
CCHCR1-214ENST00000486060 TRIQKQ629K1 86 aa12.36□□□□□ -0.43
CCHCR1-214ENST00000486060 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-214ENST00000486060 DTD1Q8TEA8 209 aa12.36□□□□□ -0.43
CCHCR1-214ENST00000486060 IGHV3-66A0A0C4DH42 116 aa12.35□□□□□ -0.43
CCHCR1-214ENST00000486060 LAMTOR1Q6IAA8 161 aa12.35□□□□□ -0.43
CCHCR1-214ENST00000486060 OR1S1Q8NH92 325 aa12.35□□□□□ -0.43
CCHCR1-214ENST00000486060 MUC7Q8TAX7 377 aa12.35□□□□□ -0.43
CCHCR1-214ENST00000486060 IGKV3-7A0A075B6H7 116 aa12.34□□□□□ -0.43
CCHCR1-214ENST00000486060 C9orf170A2RU37 121 aa12.34□□□□□ -0.43
CCHCR1-214ENST00000486060 NAP1L6A6NFF2 107 aa12.34□□□□□ -0.43
CCHCR1-214ENST00000486060 PLA2G10O15496 165 aa12.34□□□□□ -0.43
CCHCR1-214ENST00000486060 HOXB5P09067 269 aa12.34□□□□□ -0.43
CCHCR1-214ENST00000486060 ZNF124Q15973 351 aa12.34□□□□□ -0.43
CCHCR1-214ENST00000486060 GINS3Q9BRX5 216 aa12.34□□□□□ -0.43
CCHCR1-214ENST00000486060 RPS10-NUDT3A0A1W2PQS6 291 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms