RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ERGIC3Q9Y282 383 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 HEATR5BQ9P2D3 2071 aa0.73□□□□□ -2.29
GCFC2-209ENST00000486016 ZFYVE9O95405 1425 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 COL6A6A6NMZ7 2263 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 INTS1Q8N201 2190 aaKnown RBP0.72□□□□□ -2.29
GCFC2-209ENST00000486016 FADS1O60427 444 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 OR2J2O76002 312 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 IL9P15248 144 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 IAH1Q2TAA2 248 aaPredicted RBP0.72□□□□□ -2.29
GCFC2-209ENST00000486016 HIST3H2BBQ8N257 126 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 SIGLECL1Q8N7X8 197 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 C12orf29Q8N999 325 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 OR4E2Q8NGC2 313 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 BORCS7Q96B45 105 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 CMSS1Q9BQ75 279 aaKnown RBP0.72□□□□□ -2.29
GCFC2-209ENST00000486016 CCDC90BQ9GZT6 254 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 OR51V1Q9H2C8 321 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 PRELID3BQ9Y3B1 194 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 KIF13BQ9NQT8 1826 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 RIC1Q4ADV7 1423 aa0.72□□□□□ -2.29
GCFC2-209ENST00000486016 DOCK5Q9H7D0 1870 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 TRAV1-1A0A0B4J248 108 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 hADV38S2A0JD32 116 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 TCL1BO95988 128 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 RBP1P09455 135 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 ASAH2BP0C7U1 165 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 COX6A1P12074 109 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 PLCXD2Q0VAA5 305 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 EDDM3AQ14507 147 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 CDK10Q15131 360 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 RHEBQ15382 184 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 C12orf74Q32Q52 190 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 SPANXN5Q5MJ07 72 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 KRT222Q8N1A0 295 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 C12orf45Q8N5I9 185 aaPredicted RBP0.71□□□□□ -2.3
GCFC2-209ENST00000486016 GDPD1Q8N9F7 314 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 CT55Q8WUE5 264 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 RNASE7Q9H1E1 156 aaKnown RBP0.71□□□□□ -2.3
GCFC2-209ENST00000486016 TRABDQ9H4I3 376 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 UCK1Q9HA47 277 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 C14orf105Q9NVL8 296 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 GLTPQ9NZD2 209 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 NEO1Q92859 1461 aa0.71□□□□□ -2.3
GCFC2-209ENST00000486016 C2orf70A6NJV1 201 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 TMEM114B3SHH9 223 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 OR2T1O43869 369 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 ZNF682O95780 498 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 S100A4P26447 101 aaKnown RBP0.7□□□□□ -2.3
GCFC2-209ENST00000486016 BRS3P32247 399 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 HIST1H3AP68431 136 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 CTAG1AP78358 180 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 CCL7P80098 99 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 H3F3AP84243 136 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 SRSF6Q13247 344 aaKnown RBP0.7□□□□□ -2.3
GCFC2-209ENST00000486016 LINC01554Q52M75 96 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 TMEM97Q5BJF2 176 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 TEX36Q5VZQ5 186 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 PHF13Q86YI8 300 aaPredicted RBP0.7□□□□□ -2.3
GCFC2-209ENST00000486016 OR6V1Q8N148 313 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 LINC00311Q8N616 119 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 OR4C6Q8NH72 309 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 TRIM4Q9C037 500 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 MIXL1Q9H2W2 232 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 OSTCQ9NRP0 149 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 UQCC1Q9NVA1 299 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 IDI2-AS1Q9NZ38 188 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 SLC22A13Q9Y226 551 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 CYSLTR1Q9Y271 337 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 SNURFQ9Y675 71 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 DIDO1Q9BTC0 2240 aaKnown RBP0.7□□□□□ -2.3
GCFC2-209ENST00000486016 PIK3C2GO75747 1445 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 RP1P56715 2156 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 ARFGEF3Q5TH69 2177 aa0.7□□□□□ -2.3
GCFC2-209ENST00000486016 COL4A5P29400 1685 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 MICAL3Q7RTP6 2002 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 hCG_1818297A0A087WSY0 165 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 IGKV2D-26A0A0A0MRZ7 120 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 A8MT66 165 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 GEMIN2O14893 280 aaKnown RBP0.69□□□□□ -2.3
GCFC2-209ENST00000486016 PDE6DO43924 150 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 OR1I1O60431 355 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 HAND1O96004 215 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 MIFP14174 115 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 SSR2P43308 183 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 YPEL3P61236 119 aaPredicted RBP0.69□□□□□ -2.3
GCFC2-209ENST00000486016 TRAPPC6BQ86SZ2 158 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 OR51A2Q8NGJ7 313 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 GPR146Q96CH1 333 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 PRAP1Q96NZ9 151 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 ODF3Q96PU9 254 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 TAS2R4Q9NYW5 299 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 CCDC144AA2RUR9 1427 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 NCOA1Q15788 1441 aa0.69□□□□□ -2.3
GCFC2-209ENST00000486016 C19orf84I3L1E1 186 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 E2F6O75461 281 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 OR2B3O76000 313 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 UBL3O95164 117 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 SERPINE1P05121 402 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 C8GP07360 202 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 OR4E1P0C645 316 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms