RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 C2orf70A6NJV1 201 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 F8W735 103 aaPredicted RBP9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 PITX3O75364 302 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 NXPH3O95157 252 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 CTSGP08311 255 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 HOXB5P09067 269 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 FOLR2P14207 255 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 GP9P14770 177 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 ANXA7P20073 488 aaKnown RBP9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 NPBWR1P48145 328 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 ELLP55199 621 aaPredicted RBP9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 ATP5IP56385 69 aaPredicted RBP9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 RELQ04864 619 aaPredicted RBP9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 DHRS2Q13268 280 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 C2orf83Q53S99 150 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 SLC24A4Q8NFF2 622 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 UFC1Q9Y3C8 167 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 U3KQ87 197 aa9.09□□□□□ -0.95
HLA-DOA-204ENST00000485901 IGHV3-35A0A0C4DH35 117 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 FAM240BA0A1B0GVZ2 78 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 RPS10-NUDT3A0A1W2PQS6 291 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 A8MWP6 167 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 FAM90A26D6RGX4 464 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 NDUFA4O00483 81 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 GNG7O60262 68 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 MED6O75586 246 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 UPK1BO75841 260 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 IFNA21P01568 189 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 IGHV3-48P01763 117 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 CBLN1P23435 193 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 OPRK1P41145 380 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 ASAH1Q13510 395 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 GGNBP1Q5YKI7 109 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 LCN12Q6JVE5 192 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 UNQ9165/PRO28630Q6UXU0 137 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 HAPLN4Q86UW8 402 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 OR2K2Q8NGT1 345 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 RNASEH2CQ8TDP1 164 aaKnown RBP9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 DTD1Q8TEA8 209 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 DYNLRB2Q8TF09 96 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 MARC2Q969Z3 335 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 TM2D3Q9BRN9 247 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 CHRDL1Q9BU40 450 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 C20orf85Q9H1P6 137 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 RBKSQ9H477 322 aa9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 TECRQ9NZ01 308 aaKnown RBP9.08□□□□□ -0.96
HLA-DOA-204ENST00000485901 TMEM213A2RRL7 107 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 SCGB2A1O75556 95 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 IFNA10P01566 189 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 NPY1RP25929 384 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 ADMP35318 185 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 DEFB114Q30KQ6 69 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 TM4SF20Q53R12 229 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 ETFRF1Q6IPR1 90 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 ADAMTSL5Q6ZMM2 481 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 UXS1Q8NBZ7 420 aa9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 MRPL27Q9P0M9 148 aaKnown RBP9.07□□□□□ -0.96
HLA-DOA-204ENST00000485901 TRAV6A0A075B6T7 132 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 K7EMT4 169 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 ADAP1O75689 374 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 YIF1AO95070 293 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 TMEM50AO95807 157 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 H2AFB2P0C5Z0 115 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 FRMD6-AS1P0C7T7 363 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 C8orf88P0DMB2 117 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 SLC25A4P12235 298 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 RPP30P78346 268 aaKnown RBP9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 MLANAQ16655 118 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 CD300EQ496F6 205 aaPredicted RBP9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 OR4X1Q8NH49 305 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 MITD1Q8WV92 249 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 TMEM190Q8WZ59 177 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 C20orf24Q9BUV8 137 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 FNDC4Q9H6D8 234 aaPredicted RBP9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 DAZ1Q9NQZ3 744 aaKnown RBP9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 NUDT15Q9NV35 164 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 TBC1D24Q9ULP9 559 aa9.06□□□□□ -0.96
HLA-DOA-204ENST00000485901 BIRC6Q9NR09 4857 aa9.05□□□□□ -0.96
HLA-DOA-204ENST00000485901 TRAV30A0A087WSZ9 112 aa9.05□□□□□ -0.96
HLA-DOA-204ENST00000485901 C15orf62A8K5M9 175 aa9.05□□□□□ -0.96
HLA-DOA-204ENST00000485901 CLN5O75503 358 aa9.05□□□□□ -0.96
HLA-DOA-204ENST00000485901 IFNA4P05014 189 aa9.05□□□□□ -0.96
HLA-DOA-204ENST00000485901 CIB3Q96Q77 187 aaPredicted RBP9.05□□□□□ -0.96
HLA-DOA-204ENST00000485901 SYNGR2O43760 224 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 EDN2P20800 178 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 DEFA1P59665 94 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 DEFA3P59666 94 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 RAB11AP62491 216 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 IFITM3Q01628 133 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 ID3Q02535 119 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 ZNF600Q6ZNG1 722 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 TMEM116Q8NCL8 245 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 OR52B4Q8NGK2 314 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 IL17DQ8TAD2 202 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 ENKURQ8TC29 256 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 ZNF431Q8TF32 576 aaPredicted RBP9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 TMEM170AQ8WVE7 144 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 CACNG8Q8WXS5 425 aa9.04□□□□□ -0.96
HLA-DOA-204ENST00000485901 EDA2RQ9HAV5 297 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms