RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 GUSBP1Q15486 140 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 TNXAQ16473 311 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 KIAA1644Q3SXP7 199 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 RPL39P5Q59GN2 51 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 GDF5OSQ5U4N7 250 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 LCN12Q6JVE5 192 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 PET117Q6UWS5 81 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF826PQ6ZT77 177 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF329Q86UD4 541 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 FAM19A2Q8N3H0 131 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 DEFB125Q8N687 156 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 NHLRC2Q8NBF2 726 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 NUP35Q8NFH5 326 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 OR1L8Q8NGR8 309 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF596Q8TC21 504 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 LRRC29Q8WV35 223 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 CACNG8Q8WXS5 425 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 URB1-AS1Q96HZ7 61 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 CLUHP3Q96NS8 147 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 SLC25A33Q9BSK2 321 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 TMEM70Q9BUB7 260 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 SLC25A2Q9BXI2 301 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 HES7Q9BYE0 225 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 SPRY4Q9C004 299 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 LINC00574Q9H8X3 128 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 PLEKHA3Q9HB20 300 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 CALYQ9NYX4 217 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF492Q9P255 531 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 CLCF1Q9UBD9 225 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 Q9UFV3 132 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 KLF13Q9Y2Y9 288 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 PPIAL4AQ9Y536 164 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 OR51B2Q9Y5P1 312 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 REV3LO60673 3130 aa3.8□□□□□ -1.8
SMARCC1-206ENST00000485737 GTF3C1Q12789 2109 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 IGKV1D-17A0A075B6S4 117 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 TRAV34A0A0B4J273 112 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 FAM231BA6NCW3 169 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 DEFB108AA8MXU0 73 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 AHRRA9YTQ3 701 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 SYS1-DBNDD2H3BUS1 97 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 TIMM8AO60220 97 aaPredicted RBP3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 OR7C2O60412 319 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 ACTL6BO94805 426 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 TOX4O94842 621 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 FSHBP01225 129 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 IGLV1-44P01699 117 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 OR5AL1P0C617 328 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 SAA2P0DJI9 122 aaPredicted RBP3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 RNASE2P10153 161 aaKnown RBP3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 MGST1P10620 155 aaKnown RBP3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 NTF3P20783 257 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 ACP1P24666 158 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 CEACAM8P31997 349 aaPredicted RBP3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 PRDX2P32119 198 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF134P52741 427 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 MFAP2P55001 183 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 BPIFB3P59826 476 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 UBE2L3P68036 154 aaKnown RBP3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 CD69Q07108 199 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 CDSNQ15517 529 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 C3AR1Q16581 482 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 MAJINQ3KP22 176 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 Q56UQ5 140 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 BVES-AS1Q5T3Y7 98 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 C12orf54Q6X4T0 127 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 Q6ZT83 130 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 SMIM15Q7Z3B0 74 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 SPATA12Q7Z6I5 190 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 VKORC1L1Q8N0U8 176 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 ATOH7Q8N100 152 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 TPRX1Q8N7U7 411 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 GATD1Q8NB37 220 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 OR4C5Q8NGB2 326 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 OR1L4Q8NGR5 311 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 RFESDQ8TAC1 157 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 DPF1Q92782 380 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 WWC2-AS2Q96NR7 200 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 TRIB1Q96RU8 372 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 PMCHL2Q9BQD1 86 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 DCTN5Q9BTE1 182 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 GFRA4Q9GZZ7 299 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 FSCN3Q9NQT6 498 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 SPRR3Q9UBC9 169 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 AMMECR1Q9Y4X0 333 aaPredicted RBP3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 KLF12Q9Y4X4 402 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 R4GN57 208 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 UNC13CQ8NB66 2214 aa3.79□□□□□ -1.8
SMARCC1-206ENST00000485737 UNC80Q8N2C7 3258 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 IGHV1-24A0A0C4DH33 117 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 OR4C46A6NHA9 309 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 SRRM4A7MD48 611 aaKnown RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 KLRC4-KLRK1H3BQV0 150 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 SPINK4O60575 86 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 FSTL3O95633 263 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 CA1P00915 261 aaPredicted RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 TFF1P04155 84 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 LIPFP07098 398 aa3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 RPL8P62917 257 aaKnown RBP3.78□□□□□ -1.8
SMARCC1-206ENST00000485737 HBBP68871 147 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms