RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 HOXA1P49639 335 aaPredicted RBP14.02□□□□□ -0.17
COL27A1-205ENST00000485397 RORCP51449 518 aa14.02□□□□□ -0.17
COL27A1-205ENST00000485397 SUB1P53999 127 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL27A1-205ENST00000485397 TRIM16LQ309B1 348 aa14.02□□□□□ -0.17
COL27A1-205ENST00000485397 STHQ8IWL8 128 aa14.02□□□□□ -0.17
COL27A1-205ENST00000485397 PDCD10Q9BUL8 212 aa14.02□□□□□ -0.17
COL27A1-205ENST00000485397 TMEM231Q9H6L2 316 aa14.02□□□□□ -0.17
COL27A1-205ENST00000485397 CORTO00230 105 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 CLN5O75503 358 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 GIG44P09565 113 aaPredicted RBP14.01□□□□□ -0.17
COL27A1-205ENST00000485397 PRR20EP86478 221 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 PRR20CP86479 221 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 PRR20DP86480 221 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 PRR20BP86481 221 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 PRR20AP86496 221 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 ARRDC1Q8N5I2 433 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 STXBP6Q8NFX7 210 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 OR4D10Q8NGI6 311 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 C2CD4CQ8TF44 421 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 COPZ2Q9P299 210 aa14.01□□□□□ -0.17
COL27A1-205ENST00000485397 A0A1W2PS18 150 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 K7EQG2 157 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 ATG12O94817 140 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 OPRK1P41145 380 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 Q6ZRM9 215 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 OR4X1Q8NH49 305 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 TMEM230Q96A57 120 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 METTL26Q96S19 204 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 KRTAP17-1Q9BYP8 105 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 ENY2Q9NPA8 101 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 MTFP1Q9UDX5 166 aa14□□□□□ -0.17
COL27A1-205ENST00000485397 AGRNO00468 2067 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 KNCNA6PVL3 124 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 UCP1P25874 307 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 CRYBB3P26998 211 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 P2RY1P47900 373 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 TIGITQ495A1 244 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 MZT2AQ6P582 158 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 TRPT1Q86TN4 253 aaKnown RBP13.99□□□□□ -0.17
COL27A1-205ENST00000485397 Q8NAQ8 132 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 OR13C8Q8NGS7 320 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 RRNAD1Q96FB5 475 aaKnown RBP13.99□□□□□ -0.17
COL27A1-205ENST00000485397 ABHD1Q96SE0 405 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 NAA50Q9GZZ1 169 aaKnown RBP13.99□□□□□ -0.17
COL27A1-205ENST00000485397 EXTL2Q9UBQ6 330 aa13.99□□□□□ -0.17
COL27A1-205ENST00000485397 IGKV1-17P01599 117 aa13.98□□□□□ -0.17
COL27A1-205ENST00000485397 ZNF688P0C7X2 276 aa13.98□□□□□ -0.17
COL27A1-205ENST00000485397 RBMY1A1P0DJD3 496 aaKnown RBP13.98□□□□□ -0.17
COL27A1-205ENST00000485397 RBMY1CP0DJD4 496 aa13.98□□□□□ -0.17
COL27A1-205ENST00000485397 RPL5P46777 297 aaKnown RBP13.98□□□□□ -0.17
COL27A1-205ENST00000485397 RBMY1FQ15415 496 aaKnown RBP13.98□□□□□ -0.17
COL27A1-205ENST00000485397 BSXQ3C1V8 233 aa13.98□□□□□ -0.17
COL27A1-205ENST00000485397 SCGB2B2Q4G0G5 96 aa13.98□□□□□ -0.17
COL27A1-205ENST00000485397 CCDC71LQ8N9Z2 235 aa13.98□□□□□ -0.17
COL27A1-205ENST00000485397 TERB2Q8NHR7 220 aa13.98□□□□□ -0.17
COL27A1-205ENST00000485397 RNASE11Q8TAA1 199 aaKnown RBP13.98□□□□□ -0.17
COL27A1-205ENST00000485397 ZFAND1Q8TCF1 268 aa13.98□□□□□ -0.17
COL27A1-205ENST00000485397 IGHV4-28A0A0C4DH34 117 aa13.97□□□□□ -0.17
COL27A1-205ENST00000485397 IGLL5B9A064 214 aa13.97□□□□□ -0.17
COL27A1-205ENST00000485397 C4BPBP20851 252 aa13.97□□□□□ -0.17
COL27A1-205ENST00000485397 MARCH1Q8TCQ1 289 aa13.97□□□□□ -0.17
COL27A1-205ENST00000485397 DCANP1Q8TF63 244 aa13.97□□□□□ -0.17
COL27A1-205ENST00000485397 GRAMD2BQ96HH9 432 aa13.97□□□□□ -0.17
COL27A1-205ENST00000485397 APLNQ9ULZ1 77 aa13.97□□□□□ -0.17
COL27A1-205ENST00000485397 DNAH6Q9C0G6 4158 aa13.97□□□□□ -0.17
COL27A1-205ENST00000485397 RAB3DO95716 219 aa13.96□□□□□ -0.17
COL27A1-205ENST00000485397 CD74P04233 296 aa13.96□□□□□ -0.17
COL27A1-205ENST00000485397 TBPP20226 339 aa13.96□□□□□ -0.17
COL27A1-205ENST00000485397 TMEM229BQ8NBD8 167 aa13.96□□□□□ -0.17
COL27A1-205ENST00000485397 LHFPL5Q8TAF8 219 aa13.96□□□□□ -0.17
COL27A1-205ENST00000485397 AP3S1Q92572 193 aa13.96□□□□□ -0.17
COL27A1-205ENST00000485397 OR5AC1P0C628 307 aa13.95□□□□□ -0.18
COL27A1-205ENST00000485397 ZNF182P17025 639 aaPredicted RBP13.95□□□□□ -0.18
COL27A1-205ENST00000485397 TCTAP57738 103 aa13.95□□□□□ -0.18
COL27A1-205ENST00000485397 SPCS3P61009 180 aa13.95□□□□□ -0.18
COL27A1-205ENST00000485397 ACTL10Q5JWF8 245 aa13.95□□□□□ -0.18
COL27A1-205ENST00000485397 MORN3Q6PF18 240 aaPredicted RBP13.95□□□□□ -0.18
COL27A1-205ENST00000485397 NARS2Q96I59 477 aaKnown RBP13.95□□□□□ -0.18
COL27A1-205ENST00000485397 HRH4Q9H3N8 390 aa13.95□□□□□ -0.18
COL27A1-205ENST00000485397 U3KQE9 123 aa13.95□□□□□ -0.18
COL27A1-205ENST00000485397 X6R8D5 127 aa13.95□□□□□ -0.18
COL27A1-205ENST00000485397 HERC2O95714 4834 aa13.95□□□□□ -0.18
COL27A1-205ENST00000485397 TRAV30A0A087WSZ9 112 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 SCGB2A1O75556 95 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 CDS2O95674 445 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 IGLC1P0CG04 106 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 SPP1P10451 314 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 HLA-DMBP28068 263 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 TAS2R19P59542 299 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 CTF1Q16619 201 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 AARDQ4LEZ3 155 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 FAAP20Q6NZ36 180 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 STEAP1BQ6NZ63 245 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 PRSS54Q6PEW0 395 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 OR52E5Q8NH55 327 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 GLYATL2Q8WU03 294 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 TMEM222Q9H0R3 208 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.94□□□□□ -0.18
COL27A1-205ENST00000485397 CLEC5AQ9NY25 188 aa13.94□□□□□ -0.18
COL27A1-205ENST00000485397 ELOA3CA0A087WX78 387 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 806.1 ms