RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 NPY1RP25929 384 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 NPBWR1P48145 328 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 Q56UQ5 140 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 UNQ9165/PRO28630Q6UXU0 137 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 DUSP18Q8NEJ0 188 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 MRAPQ8TCY5 172 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 PINX1Q96BK5 328 aaKnown RBP12.06□□□□□ -0.48
UPF3A-208ENST00000484246 CHRDL1Q9BU40 450 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 RBKSQ9H477 322 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 FNDC4Q9H6D8 234 aaPredicted RBP12.06□□□□□ -0.48
UPF3A-208ENST00000484246 PALMDQ9NP74 551 aa12.06□□□□□ -0.48
UPF3A-208ENST00000484246 NUPL2O15504 423 aaKnown RBP12.05□□□□□ -0.48
UPF3A-208ENST00000484246 MED6O75586 246 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 ADAP1O75689 374 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 H2AFB2P0C5Z0 115 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 C8orf88P0DMB2 117 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 SPNP16150 400 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 OPRK1P41145 380 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 RELQ04864 619 aaPredicted RBP12.05□□□□□ -0.48
UPF3A-208ENST00000484246 OR4X1Q8NH49 305 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 ZC4H2Q9NQZ6 224 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 TECRQ9NZ01 308 aaKnown RBP12.05□□□□□ -0.48
UPF3A-208ENST00000484246 UFC1Q9Y3C8 167 aa12.05□□□□□ -0.48
UPF3A-208ENST00000484246 TRAV6A0A075B6T7 132 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 K7EMT4 169 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 NXPH3O95157 252 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 IFNA21P01568 189 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 IL5P05113 134 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 SLC25A4P12235 298 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 FOLR2P14207 255 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 GP9P14770 177 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 LCN12Q6JVE5 192 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 C11orf87Q6NUJ2 197 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 UBAC2Q8NBM4 344 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 ENKURQ8TC29 256 aa12.04□□□□□ -0.48
UPF3A-208ENST00000484246 ZNF431Q8TF32 576 aaPredicted RBP12.04□□□□□ -0.48
UPF3A-208ENST00000484246 CIB3Q96Q77 187 aaPredicted RBP12.04□□□□□ -0.48
UPF3A-208ENST00000484246 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
UPF3A-208ENST00000484246 LSM4Q9Y4Z0 139 aaKnown RBP12.04□□□□□ -0.48
UPF3A-208ENST00000484246 C15orf62A8K5M9 175 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 GNG7O60262 68 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 CLN5O75503 358 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 CBLN1P23435 193 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 ID3Q02535 119 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 DEFB114Q30KQ6 69 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 TMEM116Q8NCL8 245 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 OR52B4Q8NGK2 314 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 OR4D5Q8NGN0 318 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 OR10C1Q96KK4 312 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 PRR25Q96S07 402 aa12.03□□□□□ -0.48
UPF3A-208ENST00000484246 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
UPF3A-208ENST00000484246 MRPL27Q9P0M9 148 aaKnown RBP12.03□□□□□ -0.48
UPF3A-208ENST00000484246 ZNF320A2RRD8 509 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 SYNGR2O43760 224 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 SCGB2A1O75556 95 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 IFNA10P01566 189 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 IGHV3-48P01763 117 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 DEFA1P59665 94 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 DEFA3P59666 94 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 C4orf48Q5BLP8 95 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 ETFRF1Q6IPR1 90 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 DYNLRB2Q8TF09 96 aa12.02□□□□□ -0.49
UPF3A-208ENST00000484246 TRAV30A0A087WSZ9 112 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 IGHV3-35A0A0C4DH35 117 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 TMEM50AO95807 157 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 CD69Q07108 199 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 CD300EQ496F6 205 aaPredicted RBP12.01□□□□□ -0.49
UPF3A-208ENST00000484246 TM4SF20Q53R12 229 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 PRSS54Q6PEW0 395 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 ZNF600Q6ZNG1 722 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 NRARPQ7Z6K4 114 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 UXS1Q8NBZ7 420 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 SEC22CQ9BRL7 303 aa12.01□□□□□ -0.49
UPF3A-208ENST00000484246 IGKV1-17P01599 117 aa12□□□□□ -0.49
UPF3A-208ENST00000484246 IGLC1P0CG04 106 aa12□□□□□ -0.49
UPF3A-208ENST00000484246 EDN2P20800 178 aa12□□□□□ -0.49
UPF3A-208ENST00000484246 GPX4P36969 197 aaPredicted RBP12□□□□□ -0.49
UPF3A-208ENST00000484246 NKX2-1P43699 371 aaPredicted RBP12□□□□□ -0.49
UPF3A-208ENST00000484246 IAH1Q2TAA2 248 aaPredicted RBP12□□□□□ -0.49
UPF3A-208ENST00000484246 SLC16A13Q7RTY0 426 aa12□□□□□ -0.49
UPF3A-208ENST00000484246 OR1S2Q8NGQ3 325 aa12□□□□□ -0.49
UPF3A-208ENST00000484246 CACNG8Q8WXS5 425 aa12□□□□□ -0.49
UPF3A-208ENST00000484246 ZFAND3Q9H8U3 227 aa12□□□□□ -0.49
UPF3A-208ENST00000484246 MLXQ9UH92 298 aa12□□□□□ -0.49
UPF3A-208ENST00000484246 TRAV25A0A0B4J276 109 aa11.99□□□□□ -0.49
UPF3A-208ENST00000484246 PRAF2O60831 178 aa11.99□□□□□ -0.49
UPF3A-208ENST00000484246 IAPPP10997 89 aa11.99□□□□□ -0.49
UPF3A-208ENST00000484246 RPP30P78346 268 aaKnown RBP11.99□□□□□ -0.49
UPF3A-208ENST00000484246 MLANAQ16655 118 aa11.99□□□□□ -0.49
UPF3A-208ENST00000484246 C12orf45Q8N5I9 185 aaPredicted RBP11.99□□□□□ -0.49
UPF3A-208ENST00000484246 ZBTB8BQ8NAP8 495 aaPredicted RBP11.99□□□□□ -0.49
UPF3A-208ENST00000484246 MARVELD1Q9BSK0 173 aa11.99□□□□□ -0.49
UPF3A-208ENST00000484246 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
UPF3A-208ENST00000484246 SNRPGP15A8MWD9 76 aa11.98□□□□□ -0.49
UPF3A-208ENST00000484246 PRSS46E5RG02 174 aa11.98□□□□□ -0.49
UPF3A-208ENST00000484246 IFNA4P05014 189 aa11.98□□□□□ -0.49
UPF3A-208ENST00000484246 RND2P52198 227 aa11.98□□□□□ -0.49
UPF3A-208ENST00000484246 YPEL3P61236 119 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms