RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 C9orf170A2RU37 121 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 CEBPZOSA8MTT3 80 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 PPP5D1E7EU14 171 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 NDUFA4O00483 81 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 PITX3O75364 302 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 MED6O75586 246 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 OR2C1O95371 312 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 CSN3P07498 182 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 OR4E1P0C645 316 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 RNASE2P10153 161 aaKnown RBP7.57□□□□□ -1.2
CPSF4-213ENST00000484112 GPR183P32249 361 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 NPBWR1P48145 328 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 DEFA1P59665 94 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 DEFA3P59666 94 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 TNFRSF9Q07011 255 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 DHRS2Q13268 280 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 ASAH1Q13510 395 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 HAGHQ16775 308 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 ETFRF1Q6IPR1 90 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 LYG2Q86SG7 212 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 DUSP18Q8NEJ0 188 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 SLC24A4Q8NFF2 622 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 RNASEH2CQ8TDP1 164 aaKnown RBP7.57□□□□□ -1.2
CPSF4-213ENST00000484112 PPP1R14BQ96C90 147 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 MISP3Q96FF7 219 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 TUBA4BQ9H853 241 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 HEYLQ9NQ87 328 aaPredicted RBP7.57□□□□□ -1.2
CPSF4-213ENST00000484112 UFC1Q9Y3C8 167 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 HYDINQ4G0P3 5121 aa7.57□□□□□ -1.2
CPSF4-213ENST00000484112 TRAV30A0A087WSZ9 112 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 LINC00854A0A1B0GVQ3 168 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 A8MZ25 164 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 K7EMT4 169 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 NUPL2O15504 423 aaKnown RBP7.56□□□□□ -1.2
CPSF4-213ENST00000484112 MT-CO2P00403 227 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 IFNA21P01568 189 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 IGHV3-23P01764 117 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 TCRBP04435 133 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 SLC25A4P12235 298 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 ANKRD55Q3KP44 614 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 C4orf46Q504U0 113 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 Q56UQ5 140 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 OR1S1Q8NH92 325 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 MITD1Q8WV92 249 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 CIB3Q96Q77 187 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-213ENST00000484112 KRTAP17-1Q9BYP8 105 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 C20orf85Q9H1P6 137 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 RETNQ9HD89 108 aa7.56□□□□□ -1.2
CPSF4-213ENST00000484112 MRPL27Q9P0M9 148 aaKnown RBP7.56□□□□□ -1.2
CPSF4-213ENST00000484112 FAM240BA0A1B0GVZ2 78 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 OR2T8A6NH00 312 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 C2orf70A6NJV1 201 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 C15orf62A8K5M9 175 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
CPSF4-213ENST00000484112 GNG7O60262 68 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 CTSGP08311 255 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 C8orf88P0DMB2 117 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 CBLN1P23435 193 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 RPP30P78346 268 aaKnown RBP7.55□□□□□ -1.2
CPSF4-213ENST00000484112 OR4X1Q8NH49 305 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 DTD1Q8TEA8 209 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 TMEM190Q8WZ59 177 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 PINX1Q96BK5 328 aaKnown RBP7.55□□□□□ -1.2
CPSF4-213ENST00000484112 FAM110AQ9BQ89 295 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 DAZ1Q9NQZ3 744 aaKnown RBP7.55□□□□□ -1.2
CPSF4-213ENST00000484112 PRR13Q9NZ81 148 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 TBC1D24Q9ULP9 559 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 S4R3C0 116 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 LYSTQ99698 3801 aa7.55□□□□□ -1.2
CPSF4-213ENST00000484112 TRAV25A0A0B4J276 109 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 ZNF320A2RRD8 509 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 TMEM213A2RRL7 107 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 CLN5O75503 358 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 CD5P06127 495 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 FOLR2P14207 255 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 ANXA7P20073 488 aaKnown RBP7.54□□□□□ -1.2
CPSF4-213ENST00000484112 NPY1RP25929 384 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 OPRK1P41145 380 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 SPINK9Q5DT21 86 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 GGNBP1Q5YKI7 109 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 GTSCR1Q86UQ5 136 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 UBAC2Q8NBM4 344 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 TMEM116Q8NCL8 245 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 IL17DQ8TAD2 202 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 DYNLRB2Q8TF09 96 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 OR10C1Q96KK4 312 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 ZC4H2Q9NQZ6 224 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 FLVCR2Q9UPI3 526 aa7.54□□□□□ -1.2
CPSF4-213ENST00000484112 TMEM50AO95807 157 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 IFNA10P01566 189 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 HOXB5P09067 269 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 BMI1P35226 326 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 ADMP35318 185 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 GPX4P36969 197 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-213ENST00000484112 BCAP31P51572 246 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 RAB11AP62491 216 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 DEFB114Q30KQ6 69 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 ENKURQ8TC29 256 aa7.53□□□□□ -1.2
CPSF4-213ENST00000484112 CACNG8Q8WXS5 425 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms