RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 C15orf61A6NNL5 157 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 C15orf62A8K5M9 175 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 YIF1AO95070 293 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 GABARAPO95166 117 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 HLA-DQB1P01920 261 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 RANBP1P43487 201 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 CMC4P56277 68 aaPredicted RBP4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 BRWD1-AS2P59051 145 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 RPS25P62851 125 aaKnown RBP4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 Q56UQ5 140 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 PVRIGQ6DKI7 326 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 SLC25A24Q6NUK1 477 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 SPSB3Q6PJ21 355 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 TMEM91Q6ZNR0 172 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 GDPD1Q8N9F7 314 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 TMEM116Q8NCL8 245 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 VN1R17PQ8TDU5 208 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 GIMAP1Q8WWP7 306 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 RHPN1-AS1Q9BWJ2 59 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 HRH4Q9H3N8 390 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 FKBP14Q9NWM8 211 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 BET1LQ9NYM9 111 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 C21orf62Q9NYP8 219 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 SMPXQ9UHP9 88 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 ETV7Q9Y603 341 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 V9GY05 133 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 FAT2Q9NYQ8 4349 aa4.33□□□□□ -1.72
SEMA3D-204ENST00000484038 MUC4Q99102 2169 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 IGLV2-18A0A075B6J9 118 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 TRAV3A0A0B4J244 114 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 IGHV7-4-1A0A0J9YVY3 117 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 K7EMT4 169 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 CHEK1O14757 476 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 CTXN2P0C2S0 81 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 RBMY1A1P0DJD3 496 aaKnown RBP4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 RBMY1CP0DJD4 496 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 P0DMU3 169 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 FAM231AP0DMU4 169 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 FAM231CP0DMU5 169 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 DTYMKP23919 212 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 OR10A3P58181 314 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 DEFB131AP59861 70 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 PAFAH1B2P68402 229 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 RELQ04864 619 aaPredicted RBP4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 EIF4EBP1Q13541 118 aaPredicted RBP4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 IRF3Q14653 427 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 RBMY1FQ15415 496 aaKnown RBP4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 SSX1Q16384 188 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 UBE2UQ5VVX9 321 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 Q6ZS49 121 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 ZNF767PQ75MW2 155 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 STHQ8IWL8 128 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 SPAG16Q8N0X2 631 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 POM121L12Q8N7R1 296 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 DMBX1Q8NFW5 382 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 DYNC2LI1Q8TCX1 351 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 NUDCD2Q8WVJ2 157 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 SECTM1Q8WVN6 248 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 BORCS5Q969J3 196 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 RNF126Q9BV68 326 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 HINT2Q9BX68 163 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 ATG5Q9H1Y0 275 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 RNF167Q9H6Y7 350 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 PLCXD1Q9NUJ7 323 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 LSM2Q9Y333 95 aaKnown RBP4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 DNAH2Q9P225 4427 aa4.32□□□□□ -1.72
SEMA3D-204ENST00000484038 DEFB131BA0A096LNP1 70 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 LOC100506127A0A0U1RQW1 187 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 METTL21EPA6NDL7 271 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 DNASE2O00115 360 aaPredicted RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 SULT1C2O00338 296 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 UPK2O00526 184 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 NUPL2O15504 423 aaKnown RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 AMBPP02760 352 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 EIF4EP06730 217 aaKnown RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 SERPINE2P07093 398 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 TRAPPC2P0DI81 140 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 TRAPPC2BP0DI82 140 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 MIFP14174 115 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 NQO2P16083 231 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 PSMA1P25786 263 aaKnown RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 TAS2R31P59538 309 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 FABP5Q01469 135 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 WT1-ASQ06250 92 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 TRAM1Q15629 374 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 TBCEQ15813 527 aaPredicted RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 CNIH2Q6PI25 160 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 TCF24Q7RTU0 167 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 UBE2DNLQ8IWF7 75 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 OR51H1Q8NH63 302 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 FCGR1BQ92637 280 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 SRSF8Q9BRL6 282 aaKnown RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 NDUFAF3Q9BU61 184 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 DCSTAMPQ9H295 470 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 CCL28Q9NRJ3 127 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 RHBDL2Q9NX52 303 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 CELA1Q9UNI1 258 aa4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 F11RQ9Y624 299 aaKnown RBP4.31□□□□□ -1.72
SEMA3D-204ENST00000484038 PKD1P98161 4303 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms