RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	FAM25E	A8MYX2	175 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882		F8W735	103 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	SYNGR2	O43760	224 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	TMEM50A	O95807	157 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	MBP	P02686	304 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	IAPP	P10997	89 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	C4BPB	P20851	252 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	NKX2-1	P43699	371 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	PAX9	P55771	341 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	POLR2G	P62487	172 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	CYCS	P99999	105 aa	Known RBP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	EXOSC2	Q13868	293 aa	Known RBP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	MLANA	Q16655	118 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	OR11H1	Q8NG94	326 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	ZNF502	Q8TBZ5	544 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	SCARB1	Q8WTV0	552 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	C2orf50	Q96LR7	162 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	ENY2	Q9NPA8	101 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	GSKIP	Q9P0R6	139 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	CACFD1	Q9UGQ2	172 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	LSM4	Q9Y4Z0	139 aa	Known RBP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	FXYD6-FXYD2	A0A087WZ82	144 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	ANKRD34B	A5PLL1	514 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	IGHV3-48	P01763	117 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	HSPB1	P04792	205 aa	Known RBP	11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	SLC25A4	P12235	298 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	SNCA	P37840	140 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	C2orf83	Q53S99	150 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	SLC24A4	Q8NFF2	622 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	OR1L6	Q8NGR2	347 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	OR1N2	Q8NGR9	330 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	MISP3	Q96FF7	219 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	ZNF414	Q96IQ9	312 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	ASCL2	Q99929	193 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	C11orf1	Q9H5F2	150 aa		11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	MRPL36	Q9P0J6	103 aa	Known RBP	11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	RCL1	Q9Y2P8	373 aa	Known RBP	11.42	□□□□□ -0.58
NR1H3-222	ENST00000483882	COL7A1	Q02388	2944 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	C15orf62	A8K5M9	175 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882		L7N2F9	121 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	BMPR1B	O00238	502 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	WRB	O00258	174 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	LY86	O95711	162 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	MT-CO2	P00403	227 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	HTR2B	P41595	481 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	VN1R17P	Q8TDU5	208 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	PPP1R1C	Q8WVI7	109 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	OR4C12	Q96R67	309 aa		11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	PEF1	Q9UBV8	284 aa	Known RBP	11.41	□□□□□ -0.58
NR1H3-222	ENST00000483882	PPP5D1	E7EU14	171 aa		11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	ARPC5	O15511	151 aa		11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	CXCL2	P19875	107 aa		11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	NPY1R	P25929	384 aa		11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	SLURP1	P55000	103 aa		11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	ZNF616	Q08AN1	781 aa		11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	CLEC19A	Q6UXS0	136 aa		11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	PINX1	Q96BK5	328 aa	Known RBP	11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	HIPK2	Q9H2X6	1198 aa		11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.4	□□□□□ -0.58
NR1H3-222	ENST00000483882	LINC01619	G3V211	115 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882		K7EPK0	472 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	SSSCA1	O60232	199 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	MED6	O75586	246 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	MPC2	O95563	127 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	SCGB1D2	O95969	90 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	IFNA10	P01566	189 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	SUB1	P53999	127 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	ZNF767P	Q75MW2	155 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	THAP6	Q8TBB0	222 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	EEF1AKMT3	Q96AZ1	226 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	CXorf58	Q96LI9	332 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	C21orf62	Q9NYP8	219 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	THYN1	Q9P016	225 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882		U3KQ87	197 aa		11.39	□□□□□ -0.59
NR1H3-222	ENST00000483882	TRBV7-1	A0A0A6YYK4	115 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882		H3BP45	60 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	CYB5B	O43169	146 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	CLEC3B	P05452	202 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	OR8U8	P0C7N1	319 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	RAB32	Q13637	225 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	OPCML	Q14982	345 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	DCUN1D4	Q92564	292 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	DLX4	Q92988	240 aa	Predicted RBP	11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	SMIM8	Q96KF7	97 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	ZC4H2	Q9NQZ6	224 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	TNFSF18	Q9UNG2	199 aa		11.38	□□□□□ -0.59
NR1H3-222	ENST00000483882	PMS2P5	A8MQ11	134 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	PRSS46	E5RG02	174 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882		H0YIZ8	118 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	TSC22D2	O75157	780 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	PET100	P0DJ07	73 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	LYL1	P12980	280 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	S100A11	P31949	105 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	GPR183	P32249	361 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	ADM	P35318	185 aa		11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	KLF5	Q13887	457 aa	Predicted RBP	11.37	□□□□□ -0.59
NR1H3-222	ENST00000483882	ZNF345	Q14585	488 aa		11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms