RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ZNF726P1Q15940 193 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 SSX2Q16385 188 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 KLK9Q2XQG4 91 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 FFAR4Q5NUL3 377 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 ACSM6Q6P461 480 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 SLC35E3Q7Z769 313 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 TMEM116Q8NCL8 245 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 OR10W1Q8NGF6 305 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 NANPQ8TBE9 248 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 RCC1LQ96I51 464 aaKnown RBP4.31□□□□□ -1.72
COL17A1-206ENST00000483876 NARS2Q96I59 477 aaKnown RBP4.31□□□□□ -1.72
COL17A1-206ENST00000483876 AJUBAQ96IF1 538 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 EAF1Q96JC9 268 aaPredicted RBP4.31□□□□□ -1.72
COL17A1-206ENST00000483876 SLC35E1Q96K37 410 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 TMEM68Q96MH6 324 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 MGST2Q99735 147 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 EIF5A2Q9GZV4 153 aaKnown RBP4.31□□□□□ -1.72
COL17A1-206ENST00000483876 MEGF9Q9H1U4 602 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 NARFLQ9H6Q4 476 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 METTL1Q9UBP6 276 aaKnown RBP4.31□□□□□ -1.72
COL17A1-206ENST00000483876 KLK9Q9UKQ9 250 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 SLC45A2Q9UMX9 530 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 RFNGQ9Y644 331 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 TNCP24821 2201 aa4.31□□□□□ -1.72
COL17A1-206ENST00000483876 IGHV3-72A0A0B4J1Y9 119 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 TRAV20A0A0B4J274 112 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 IGHV4-61A0A0C4DH41 118 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 CENPVL3A0A0U1RRI6 287 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 A0A1W2PPV4 95 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 MAP1LC3B2A6NCE7 125 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 TEX22C9J3V5 150 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 C9JQL5 133 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 NPFFO15130 113 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 YIF1AO95070 293 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 MT-CO2P00403 227 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 IFNA1P01562 189 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 IGKV1D-33P01593 117 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 IGKV1-33P01594 117 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 OPN1MWP04001 364 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 FBP1P09467 338 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 LINC00869P0C866 280 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 OPN1MW2P0DN77 364 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 OPN1MW3P0DN78 364 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 MYOD1P15172 320 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 ADCYAP1P18509 176 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 B2MP61769 119 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 RHOBP62745 196 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 MMDQ15546 238 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 TNXAQ16473 311 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 C5orf64Q2M2E5 130 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 SOHLH1Q5JUK2 328 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 FAM120AOSQ5T036 256 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 LHFPL4Q7Z7J7 247 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 TTC9CQ8N5M4 171 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 THAP8Q8NA92 274 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 GATAD1Q8WUU5 269 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 RAB24Q969Q5 203 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 RNF2Q99496 336 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 ZNF747Q9BV97 191 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 GGTLC1Q9BX51 225 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 MAP1LC3BQ9GZQ8 125 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 FBXL15Q9H469 300 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 VSIRQ9H7M9 311 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 MANBALQ9NQG1 85 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 VAX2Q9UIW0 290 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 FAM96BQ9Y3D0 163 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 HILPDAQ9Y5L2 63 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 F11RQ9Y624 299 aaKnown RBP4.3□□□□□ -1.72
COL17A1-206ENST00000483876 PXMP4Q9Y6I8 212 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 ABCA1O95477 2261 aa4.3□□□□□ -1.72
COL17A1-206ENST00000483876 TET2Q6N021 2002 aaPredicted RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 RYR1P21817 5038 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 ELOA3CA0A087WX78 387 aaPredicted RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 IGHV1-69DA0A0B4J2H0 117 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 LOC102723971A0A1B0GUV8 181 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 NPIPB5A8MRT5 1133 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 TMEM250H0YL14 139 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 J3QLI3 93 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 FCN1O00602 326 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 CLN5O75503 358 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 CNIH1O95406 144 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 CXorf1O96002 111 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 IGHV1-69P01742 117 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 MSMBP08118 114 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 SRP19P09132 144 aaKnown RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 STAG3L2P0CL84 134 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 STAG3L3P0CL85 134 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 BCL2P10415 239 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 CTRB1P17538 263 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 CNTFRP26992 372 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 ELLP55199 621 aaPredicted RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 DLX1P56177 255 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 CX3CL1P78423 397 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 SSBP2P81877 361 aaPredicted RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 DEFA5Q01523 94 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 AKR1C1Q04828 323 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 LOXL1Q08397 574 aaPredicted RBP4.29□□□□□ -1.72
COL17A1-206ENST00000483876 KLRD1Q13241 179 aa4.29□□□□□ -1.72
COL17A1-206ENST00000483876 HNF4GQ14541 408 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms