RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SSMEM1Q8WWF3 244 aa20.85■□□□□ 0.93
SHOX2-204ENST00000483851 NDUFS6O75380 124 aaKnown RBP20.84■□□□□ 0.93
SHOX2-204ENST00000483851 CRYGCP07315 174 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 EIF3GO75821 320 aaKnown RBP eCLIP20.84■□□□□ 0.93
SHOX2-204ENST00000483851 PRR20EP86478 221 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 PRR20CP86479 221 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 PRR20DP86480 221 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 PRR20BP86481 221 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 PRR20AP86496 221 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 FBLN7Q53RD9 439 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 Q5PR19 223 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 SLC25A22Q9H936 323 aa20.84■□□□□ 0.93
SHOX2-204ENST00000483851 FBN2P35556 2912 aa20.83■□□□□ 0.93
SHOX2-204ENST00000483851 HLA-DRB1P01911 266 aa20.83■□□□□ 0.92
SHOX2-204ENST00000483851 REG1AP05451 166 aa20.83■□□□□ 0.92
SHOX2-204ENST00000483851 RAB5AP20339 215 aa20.83■□□□□ 0.92
SHOX2-204ENST00000483851 TAGLN2P37802 199 aaKnown RBP20.83■□□□□ 0.92
SHOX2-204ENST00000483851 RBMS3Q6XE24 437 aaKnown RBP20.83■□□□□ 0.92
SHOX2-204ENST00000483851 FAM24BQ8N5W8 94 aa20.83■□□□□ 0.92
SHOX2-204ENST00000483851 Q8N9W7 124 aa20.83■□□□□ 0.92
SHOX2-204ENST00000483851 SAV1Q9H4B6 383 aaPredicted RBP20.83■□□□□ 0.92
SHOX2-204ENST00000483851 FNDC4Q9H6D8 234 aaPredicted RBP20.83■□□□□ 0.92
SHOX2-204ENST00000483851 SLC45A2Q9UMX9 530 aa20.83■□□□□ 0.92
SHOX2-204ENST00000483851 NAV3Q8IVL0 2385 aa20.83■□□□□ 0.92
SHOX2-204ENST00000483851 OR2C1O95371 312 aa20.82■□□□□ 0.92
SHOX2-204ENST00000483851 BPIFB3P59826 476 aa20.82■□□□□ 0.92
SHOX2-204ENST00000483851 B2MP61769 119 aa20.82■□□□□ 0.92
SHOX2-204ENST00000483851 CX3CL1P78423 397 aa20.82■□□□□ 0.92
SHOX2-204ENST00000483851 TMEM249Q2WGJ8 235 aa20.82■□□□□ 0.92
SHOX2-204ENST00000483851 FAM120AOSQ5T036 256 aa20.82■□□□□ 0.92
SHOX2-204ENST00000483851 ABHD5Q8WTS1 349 aa20.82■□□□□ 0.92
SHOX2-204ENST00000483851 BIN3Q9NQY0 253 aa20.82■□□□□ 0.92
SHOX2-204ENST00000483851 YIF1AO95070 293 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 CD81P60033 236 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 MIC13Q5XKP0 118 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 RUSC1-AS1Q66K80 236 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 STPG3Q8N7X2 389 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 ARPC1AQ92747 370 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 RAB24Q969Q5 203 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 CDC34P49427 236 aaPredicted RBP20.81■□□□□ 0.92
SHOX2-204ENST00000483851 MFAP2P55001 183 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 RAB5BP61020 215 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 MLANAQ16655 118 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.81■□□□□ 0.92
SHOX2-204ENST00000483851 THAP8Q8NA92 274 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 C22orf15Q8WYQ4 148 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 TMPRSS5Q9H3S3 457 aa20.81■□□□□ 0.92
SHOX2-204ENST00000483851 IGKV1OR2-108A0A075B7D4 117 aa20.8■□□□□ 0.92
SHOX2-204ENST00000483851 B4DEV8 164 aa20.8■□□□□ 0.92
SHOX2-204ENST00000483851 IGHV4-38-2P0DP08 117 aa20.8■□□□□ 0.92
SHOX2-204ENST00000483851 RASL11BQ9BPW5 248 aa20.8■□□□□ 0.92
SHOX2-204ENST00000483851 ASH1LQ9NR48 2969 aaKnown RBP20.8■□□□□ 0.92
SHOX2-204ENST00000483851 NPIPB5A8MRT5 1133 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 C1orf196B1AJZ1 125 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 MEF2BQ02080 365 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-204ENST00000483851 PNRC1Q12796 327 aaPredicted RBP20.79■□□□□ 0.92
SHOX2-204ENST00000483851 ZFP82Q8N141 532 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 C19orf24Q9BVV8 132 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 A0A1W2PPV4 95 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 CXorf65A6NEN9 183 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 ZNF727A8MUV8 499 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 TMEM116Q8NCL8 245 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 OR2T6Q8NHC8 308 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 C2CD4CQ8TF44 421 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 MISP3Q96FF7 219 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 SDF2L1Q9HCN8 221 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 DOPEY2Q9Y3R5 2298 aa20.79■□□□□ 0.92
SHOX2-204ENST00000483851 RNF223E7ERA6 249 aa20.78■□□□□ 0.92
SHOX2-204ENST00000483851 LINC00869P0C866 280 aa20.78■□□□□ 0.92
SHOX2-204ENST00000483851 OR10J1P30954 320 aa20.78■□□□□ 0.92
SHOX2-204ENST00000483851 BRD3OSQ6XYD6 125 aa20.78■□□□□ 0.92
SHOX2-204ENST00000483851 ACY3Q96HD9 319 aa20.78■□□□□ 0.92
SHOX2-204ENST00000483851 WNT10AQ9GZT5 417 aa20.78■□□□□ 0.92
SHOX2-204ENST00000483851 MANBALQ9NQG1 85 aa20.78■□□□□ 0.92
SHOX2-204ENST00000483851 A0A0U1RQK1 487 aa20.77■□□□□ 0.92
SHOX2-204ENST00000483851 HMGB3O15347 200 aaKnown RBP20.77■□□□□ 0.92
SHOX2-204ENST00000483851 SELENOTP62341 195 aa20.77■□□□□ 0.92
SHOX2-204ENST00000483851 IGHV3OR16-10A0A075B7F0 116 aa20.77■□□□□ 0.92
SHOX2-204ENST00000483851 TTC9CQ8N5M4 171 aa20.77■□□□□ 0.92
SHOX2-204ENST00000483851 NPIPB3Q92617 1050 aa20.77■□□□□ 0.92
SHOX2-204ENST00000483851 RBM14Q96PK6 669 aaKnown RBP20.77■□□□□ 0.92
SHOX2-204ENST00000483851 IGHV7-81A0A0B4J1V7 117 aa20.76■□□□□ 0.91
SHOX2-204ENST00000483851 TMEM250H0YL14 139 aa20.76■□□□□ 0.91
SHOX2-204ENST00000483851 APELAP0DMC3 54 aa20.76■□□□□ 0.91
SHOX2-204ENST00000483851 DEFA4P12838 97 aa20.76■□□□□ 0.91
SHOX2-204ENST00000483851 RHOBP62745 196 aa20.76■□□□□ 0.91
SHOX2-204ENST00000483851 KLF17Q5JT82 389 aaPredicted RBP20.76■□□□□ 0.91
SHOX2-204ENST00000483851 CYP2G1PQ6ZSU1 146 aa20.76■□□□□ 0.91
SHOX2-204ENST00000483851 C1QL4Q86Z23 238 aa20.76■□□□□ 0.91
SHOX2-204ENST00000483851 TENM4Q6N022 2769 aa20.76■□□□□ 0.91
SHOX2-204ENST00000483851 TGFAP01135 160 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 PSMB3P49720 205 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 SLC25A33Q9BSK2 321 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 TCRBV4S1A1TA0A5B7 111 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 ELOBQ15370 118 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 GCSAMLQ5JQS6 135 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 PIFOQ8TCI5 191 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 GATAD1Q8WUU5 269 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 TMEM242Q9NWH2 141 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 MOB4Q9Y3A3 225 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms